Gene Mboo_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0905 
Symbol 
ID5410401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp886245 
End bp886607 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content58% 
IMG OID640868131 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001404066 
Protein GI154150448 
COG category[S] Function unknown 
COG ID[COG1990] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00283] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000145084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACCCG AGCCCGTGTT CAGGTACAAG CAGTGCCTGA TTGTGCGAAA CGATATCAAG 
ATGAGCTGCG GCAAGAAATG CGCACAGGCA GCGCATGCCT CCATCGGGGC GTTTGAGAGC
GCGGACAAAA CGCTCCGCAA GGCCTGGCAG GCAGAGGGGC AAAAAAAGGT AGTGCTCCGG
GCTGATTCTG AGCGGGCGCT TTTTGAGATT AAGGTAGTTG CTGAGCGTTC GGGGATCTCC
ACATCGCTTA TCCAGGATGC CGGTATGACC GAGATCCCGC CCGGCACGAT TACCGCCCTT
GGCCTTGGGC CGGCAAGGAC TGAAGATTTG GACAAGATCA CCGGCTCGCT TTCGCTCCTA
TGA
 
Protein sequence
MAPEPVFRYK QCLIVRNDIK MSCGKKCAQA AHASIGAFES ADKTLRKAWQ AEGQKKVVLR 
ADSERALFEI KVVAERSGIS TSLIQDAGMT EIPPGTITAL GLGPARTEDL DKITGSLSLL