Gene Mboo_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0892 
Symbol 
ID5411857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp873772 
End bp874470 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content56% 
IMG OID640868118 
ProductABC transporter related 
Protein accessionYP_001404053 
Protein GI154150435 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.494733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0891232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG CTTCGATGGT AAAGCGCCTG CGCGATTACA CGCTTGATTT TACGCTTCGG 
GCAGAATCCG GGCAGATCAC CGTCCTGATG GGTACAAACG GCTCGGGAAA ATCGACCTCC
CTCAATATCA TTGCCGGCCT CCTGCAACCG GATACTGCGA AGATCACCTT AAACGGGGAG
TGCATCTGCG AAACCCGGGA AGGGATCAAT ATACCGGTTG AGGATCGCCG GATTGGTTAT
GTTCTCCAGA ATCCTGCGGT CTTTCCCCAT ATGACCGTAC ATGACAATGT GGCATTTGGC
CTTCGTGCCC GGCGCACCCC GAAAGCAGAA GTTACCGGAT ATGTGGCTGA ATGGATGGAT
CGTATGCATA TCACGGATCT TGCCGGAGTC AAAGCCGGGA ACCTTTCAGG GGGGCAGAAG
CAGCGGGTAG CCCTTGCCCG GGCACTGGCA ACAGATCCCG TTCTTCTGAT GCTGGACGAG
CCTTTCACCG CTCTTGATGC AGAGAGTACA CAGTCTGTAA AGGATCTTAC ACGGCAGTAT
GTCCGCGACT TTAACATTCC CTGCATCCTT GTGACACACC GGGTTGCCGA CAGCGAGGAG
ATCGGTGACC GGGCCTGTGT GCTCTGCCAG GGAAGGATGG AATGGGAGGG TATTCCAACC
GAAATGCCGG AGCTCTGCAC GGTCTGCCGG TGCCCATGA
 
Protein sequence
MLEASMVKRL RDYTLDFTLR AESGQITVLM GTNGSGKSTS LNIIAGLLQP DTAKITLNGE 
CICETREGIN IPVEDRRIGY VLQNPAVFPH MTVHDNVAFG LRARRTPKAE VTGYVAEWMD
RMHITDLAGV KAGNLSGGQK QRVALARALA TDPVLLMLDE PFTALDAEST QSVKDLTRQY
VRDFNIPCIL VTHRVADSEE IGDRACVLCQ GRMEWEGIPT EMPELCTVCR CP