Gene Mboo_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0888 
Symbol 
ID5411853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp870535 
End bp871281 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID640868114 
Productmembrane-bound metal-dependent hydrolase 
Protein accessionYP_001404049 
Protein GI154150431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.661415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.450996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GGCATCATTT CGCACTTGCT CTCATCTGCT CCCTTATCCT CTTCAGTTCC 
TTCCTTTTTA CCCGACCGAT TATAGCATTT CTCGTGTGCA CCGGTACCTG CATAGGGTCA
CTCCTGCCCG ACATCCACAT GTCCCGGCCA AAAAAAACAG GCCCGCGGAC GCTTGCATGG
GCTCTTGTCC AGCTTCCCCG GAAAGCCTGT GCGTGGATCC TGTACCGGAT CTATGCTGCC
CTCGAACTGC CGGTAACCGA TCCGACTGAT AAACGCCTCA CTCATTCTCT CCCGGGAATA
CTCTTTATAA CACTCAGTTC CGGCCTGCTT CTGCTCATTC CTGCATATAT CATCTCACCC
GCCAACACAA TCGATGGTAT AATCTTCCTT TTCGGGCTTT TCCTTGGCAT GATATTCCAT
CTCATCGAAG ATCTATGCAC ACGGAAAGGG ATCTTCCCTT TTTTCCCGTT GAGCCAAACG
CAGATTGCCG GATCCATCCG CCCCTGTGAC CATGAGGATC ACCGTATCAG GTGGTTCCAT
GTGCTGCATG GCGGAGTGCT CCTTATCCTT CTCATCCTGG ATGGCACGGG GATCCTTGTA
CCGGCACTTG CATTCCCTGC CGGCCTTGCA GGTCTTGCGA TATGCCTTGG GATCATGGTG
TACTTGTCAG ATGTTACCGT CCGGCAGGCT TCCTCACCGG GAGCCCGGGT ACAACCGGCT
GCAGTCCAGG GAACAGGCCG CCGGTAA
 
Protein sequence
MITRHHFALA LICSLILFSS FLFTRPIIAF LVCTGTCIGS LLPDIHMSRP KKTGPRTLAW 
ALVQLPRKAC AWILYRIYAA LELPVTDPTD KRLTHSLPGI LFITLSSGLL LLIPAYIISP
ANTIDGIIFL FGLFLGMIFH LIEDLCTRKG IFPFFPLSQT QIAGSIRPCD HEDHRIRWFH
VLHGGVLLIL LILDGTGILV PALAFPAGLA GLAICLGIMV YLSDVTVRQA SSPGARVQPA
AVQGTGRR