Gene Mboo_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0868 
Symbol 
ID5410581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp845682 
End bp846533 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content55% 
IMG OID640868094 
Producthypothetical protein 
Protein accessionYP_001404029 
Protein GI154150411 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.396499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC ATTTTTTTCT CTTAAGGGAC AGCCTCAGTC AGGAGCGGAT CGGCTGGATC 
GATGAACTGC TGAAATTTTA TTTCTTAAAA CTCAATCCGC AGAGCTTCCG CCATACCACT
CATTACCGGG AAGCTGCCTT CACCTTTTAT TTAACCGGGG ATGCCCTGTA CAGTCTCCAG
AACCCGGAAA CTGCCGGCCT CTGGGAGAGT CTCTTTTCCC TGCCCTCGAT AAAAATTGTC
TGCGATCAGG AGGAACTCGC CCTCCGTGGC ATTACCGTGG AACGCCTGAA GATGAAGAAC
CCGGATCTGG TGATCACCCA CAACAGCCTG GCGCTCAACG GGAGAACCTC GTTCTGGAAA
GATGTGATGA AAGATGCCCG CCAGCACGAT CAGCCCATAC CAAGCACCAT CGGCTTTTTC
CACATGACCT CCCCGTACAT GTATCAGTCT TCAGAAAAAC TGATGCAGGG GCTGGGCGCG
GCACTCGAAA CCCATGCGTC ATGGGATCTC TACTGCTATC TTGACGGGAT CCATGTCGGG
CACCAGGGCC AAATCCCCCT GGATGCGGAA AACGTCGGGG AAGGCCTCGA TGATCTGGAA
GAGCGGGCCG GAAAACGGGG CCTTCACGGA CAGATTATGG CAAGCGCCCG CTGTGCGGCT
GCACGGGGAT ACTGCACCCA TGAAGGGGAG AAAGAGGGCC TTGTGCCTGC CTGTATGATC
AGGCCGGTCA GGATCCGCAC CTTGCCTGAG ATCGCTGCCC AGTTCCGCAG CAACCATATC
ATCCTTGGCG AAAACAGTGC CTCAGTCTCC ATGAAAAAGG AGACGATCAA GCCGGGGACT
GAGTTTCGAT GA
 
Protein sequence
MTAHFFLLRD SLSQERIGWI DELLKFYFLK LNPQSFRHTT HYREAAFTFY LTGDALYSLQ 
NPETAGLWES LFSLPSIKIV CDQEELALRG ITVERLKMKN PDLVITHNSL ALNGRTSFWK
DVMKDARQHD QPIPSTIGFF HMTSPYMYQS SEKLMQGLGA ALETHASWDL YCYLDGIHVG
HQGQIPLDAE NVGEGLDDLE ERAGKRGLHG QIMASARCAA ARGYCTHEGE KEGLVPACMI
RPVRIRTLPE IAAQFRSNHI ILGENSASVS MKKETIKPGT EFR