| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0864 |
|---|
| Symbol | |
|---|
| ID | 5410577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 842658 |
|---|
| End bp | 843407 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640868090 |
|---|
| Product | putative CoA-substrate-specific enzyme activase |
|---|
| Protein accession | YP_001404025 |
|---|
| Protein GI | 154150407 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.224978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATACG CGGGAATTGA TATCGGATCA AGGACGGTAA AACTTGCCGT AATCGAAGAC
GGCAGGCTGG TCCTTTCCCG CAAGTCGGCA ACCTCGCACA ACCCTCTGGG GATCGCACAC
GAACTCATGG AGGGAGTGGA CTATGACCGG CTCACTGCCA CCGGATACGG CCGTCACCTG
ATCAAAGGGC ATCTCGACTG CCCGGTGGTA AGCGAGATCA CGGCGTTTGT CCGGGGTTCC
CGCTTTTTTT CAAACGATTG CGAATCGATC CTTGATATCG GTGGCCAGGA CACTAAGGCC
ATCTCCCTTG ACAAAGACGG TAACCTGTGC AAGTTCGAGA TGAACGACCG GTGTGCGGCC
GGGACCGGCC GGTTCCTTGA GGTCATGGCG ACCGTGCTTG GGTTTACCCT GGAAGAGTTC
TCTCTTGCCG CCCTTTCCGC AAAAAGGGCA GAGAAGATCA ACAGCATGTG CACGGTCTTT
GCCGAGTCAG AGGTAGTATC CCTTGTTACC CAGGGTGCGG ACCGAAACGA GGTTGCCCTT
GGGATCCACA AGGCAATTAT CAGCCGTGCT GCGGGGCTCT TGAAACGTGT TGCTCCCTCA
GGAAAGATCT TTTTTGCCGG GGGCGTTGCA TTAAACGGCT GTGCACGTTC ACTCCTCGAA
CAGGAGACGG ATAGACCGGT CTTTGTCCCA CCCGATCCCC AGATTGTCGG GGCGGTTGGT
GCGGCACTGG TCGCATCGGA AAACAGTTAA
|
|---|
| Protein sequence | MRYAGIDIGS RTVKLAVIED GRLVLSRKSA TSHNPLGIAH ELMEGVDYDR LTATGYGRHL
IKGHLDCPVV SEITAFVRGS RFFSNDCESI LDIGGQDTKA ISLDKDGNLC KFEMNDRCAA
GTGRFLEVMA TVLGFTLEEF SLAALSAKRA EKINSMCTVF AESEVVSLVT QGADRNEVAL
GIHKAIISRA AGLLKRVAPS GKIFFAGGVA LNGCARSLLE QETDRPVFVP PDPQIVGAVG
AALVASENS
|
|---|
| |