Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0843 |
Symbol | |
ID | 5410032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 821381 |
End bp | 822844 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640868068 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001404004 |
Protein GI | 154150386 |
COG category | [R] General function prediction only |
COG ID | [COG1964] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.996552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATAA AGAAAACACG CAGCCTTTGC CCAGTCTGTG GGTCGGTTCT CGAAGCAGAG ATCGTAGAGG AAGAGGGAAA GATCTGGCTT GTGCGGACCT GCCCTGAACA CGGAACATTC CGGCACCTTT ACTGGTCAGA TGCGGAGATG TACCACCGGT TCGAGCATTA CGATGCAGTC GGACGAGGTG TGACCAATCC GCAGAACCCT GTGGCGTCCG ATACCTGCCC GACAGCATGC GGCCTGTGCA GCAACCACCA TTCCGGTACG CTGCTTGCAA ATATCGACCT GACCAACCGG TGCAACCTGG ATTGCGACTT CTGCTTTGCC AATGCCCGTG CATGCGGGTT TGTGTATGAA CCTTCATTTG ACGAAATCGT CGGCATGATG CAGGTGCTCC GGAGCGAAAA ACCGGTACCT GCTCCTGCCG TACAGTTCTC CGGCGGGGAG CCGACCATGC GGGACGATCT CGTGGAGATT GTCAAAAAAG CAAAGGAACT GGGATTCCCG CAGGTCCAGA TCGCCACAAA CGGTGTAAAA CTGGCCAATA ACCCGGTGCT TGCCCAGCAG CTCAAGGATG CCGGGCTGTC TACCGTGTAT CTCCATTTCG ACGGGGTCAC ACCGGCCACG AACCCGTTTT TGAAGATCCA CCTCAAGGCG CTGGAGAACC TTAACAAGGC CGGCCTCGGG GTAGTGCTCG TCCCGACCAT CATCAAGGGG AGAAACGATA AAGAGGTTGG CGAGATCCTC AAATTTGCCG CCGACCATAT CTCGATTGTG CGGGGTGTCA ACTTCCAGCC GGTATCCTTT ACCGGGGCAA AAAATGATGA GGATATCGAT AAGGAAAGAA TCACGATCCC CGAGCTTATC GACGATATCG AGGCACAGAC AAATGGCGTC CTGAATAAGA GCGATTTTTA CCCGGTGCCC TGTGTCCTGC CATTCTCTGA TCTCGTTGAG GCCTACACGG GCCGGCCCCA GGTCCGCTTC ACCGCCCACG AACACTGCGG TGCGGCAACG TATGTCTTTG TCACCAAAGA CGGCATGACC CCGGTGACCC GGATGGTCGA CGTGGAAAGC CTCTTTTCCG CGATCGAGCA GATGGCAAAC AAACTCAAAA AAGGCGGGAC GATCAACAAG TACGCCACCC TGCTTGAAGG CGTAAAAGAG CTCCATGCCT CGTTCAAGAA AGGTGAGAAG GGGAGCACAG CGGAGTTCTG GAAACTGATT GGAAAGACCC TGATCGGCCA GAACTTCGAT GCACTGCGGG AGTTCCACTG GAATGCGCTT TTTATCGGGA CCATGCATTT CATGGACAAG TACAATTACG ATATCGAGCG CGTACAGCGC TGCTGCATCC ATTACGCCAC GCCGGATGGC AAACTGATTC CTTTCTGTAC CTACAACAGC GGCCCGGTGT ACCGCGAGCA GGTCTGGAAG AAACATGCAA AAAAGCAGCA GTAA
|
Protein sequence | MAIKKTRSLC PVCGSVLEAE IVEEEGKIWL VRTCPEHGTF RHLYWSDAEM YHRFEHYDAV GRGVTNPQNP VASDTCPTAC GLCSNHHSGT LLANIDLTNR CNLDCDFCFA NARACGFVYE PSFDEIVGMM QVLRSEKPVP APAVQFSGGE PTMRDDLVEI VKKAKELGFP QVQIATNGVK LANNPVLAQQ LKDAGLSTVY LHFDGVTPAT NPFLKIHLKA LENLNKAGLG VVLVPTIIKG RNDKEVGEIL KFAADHISIV RGVNFQPVSF TGAKNDEDID KERITIPELI DDIEAQTNGV LNKSDFYPVP CVLPFSDLVE AYTGRPQVRF TAHEHCGAAT YVFVTKDGMT PVTRMVDVES LFSAIEQMAN KLKKGGTINK YATLLEGVKE LHASFKKGEK GSTAEFWKLI GKTLIGQNFD ALREFHWNAL FIGTMHFMDK YNYDIERVQR CCIHYATPDG KLIPFCTYNS GPVYREQVWK KHAKKQQ
|
| |