| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0824 |
|---|
| Symbol | |
|---|
| ID | 5410062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 801064 |
|---|
| End bp | 801699 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640868049 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403985 |
|---|
| Protein GI | 154150367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00713824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.34872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCG GATACGGTAT CCTTTGTTGC CTGTGTGTGG CAGCACTCAT GGGTTCCGGC
TGCCTCTCGG CCCTTTTTTC CTCTCCTTCG GTACCGGAAC CTGCCTCTAC TACCGTTCCA
ACTCCTGTCC CGACAACCGT GAACCCGGCA TCAACTGTTC CGGTATCGCA GATGGCCCTC
CAGCCCACAG ACCTGCCCTC CGGTTATATC CTCAGGGACC GATCCGATAT CAGTTATCTT
GAGACGGACC AGATAGAGCG GAACCTGGGC TGGAAAGCCG GGTACAAAGT TACGTACTAC
CACCTGGATC TGCAGCAATA CGATATGACC ACGATTTCAC AGGAGATCGA TCTCTATACT
CCTATAACCA TGAACACCGT GTTCAATGTC CGTAAAGACA GCATTACCGG ACAGGGTACA
GGAAGTTCCC CGATCTATGA ACTGCCCTGT CCCAGCATGG GGGACCATAC TTTTGCCTAT
CGTACAGGGG ATTCATCGGA TCCGTACTCC TACACGTCGT ATTCGATCCT GTTTACCAGG
AAGGACGTGT TCGAGGAGAT TAACATGAGC GGGACAACCA CGGATTTCGA ACTGCTCAAA
TCCCTGGCCC AGACCGCATC GGACAGGATC CAGTAG
|
|---|
| Protein sequence | MYAGYGILCC LCVAALMGSG CLSALFSSPS VPEPASTTVP TPVPTTVNPA STVPVSQMAL
QPTDLPSGYI LRDRSDISYL ETDQIERNLG WKAGYKVTYY HLDLQQYDMT TISQEIDLYT
PITMNTVFNV RKDSITGQGT GSSPIYELPC PSMGDHTFAY RTGDSSDPYS YTSYSILFTR
KDVFEEINMS GTTTDFELLK SLAQTASDRI Q
|
|---|
| |