Gene Mboo_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0816 
Symbol 
ID5411495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp789076 
End bp789744 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID640868041 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001403977 
Protein GI154150359 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTA CCTGGCTTGG CCATGCATGT GTTCTGCTTA CCGGTACAAA AAAAGTCCTT 
ATCGACCCGT TCATTCCTGA AGGGAGCGTT GCCGGTACCG ACCCGGACCT TGTCCTTGTC
ACCCATGGTC ATTTTGATCA CATGGGCGAG GCTGTTACGC TCAAAAAACC GACCGTGGCA
ATCGGCGAAC TTGCCCGGTA CCTCCAGGCA AAGGGAGTTC CGGCCGAGGG GATGAATATT
GGCGGCACCA TCGAATCCGG CGGGATCATG GTTACCATGA CCCCGGCCCT CCATACCTCA
GGGATCGATG ATCCGGCCGG CGCCGGGTGC GCCGGGACCG CTGCGGGATT TGTGGTCCGG
ATGGACGGGG TGTGCGTGTA TCATGCCGGG GATACCGGCC TCTTTTCGGA TATGAAACTG
ATAGGCGAAC TTTACCATCC CGATGTCGCC CTTCTTCCGA TAGGCGGGAG GTACACGATG
GGGACAAAAG AGGCAATGGT GGCAGCGCAG TTTATTGGTG CAAAGACCGT GATCCCCATC
CATTACAATA CCTGGGAGAA GATCGCGGCA GATGCGAATG GGTTCAAGAC TGCAATCGAA
CGATCAACCG ATTTATCCGT ATTCCTTCTC GGGCCCGGAG AAAGTATGGA TATTCCCCCG
TCCCGGTAA
 
Protein sequence
MHLTWLGHAC VLLTGTKKVL IDPFIPEGSV AGTDPDLVLV THGHFDHMGE AVTLKKPTVA 
IGELARYLQA KGVPAEGMNI GGTIESGGIM VTMTPALHTS GIDDPAGAGC AGTAAGFVVR
MDGVCVYHAG DTGLFSDMKL IGELYHPDVA LLPIGGRYTM GTKEAMVAAQ FIGAKTVIPI
HYNTWEKIAA DANGFKTAIE RSTDLSVFLL GPGESMDIPP SR