Gene Mboo_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0804 
Symbol 
ID5410530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp773985 
End bp774665 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID640868028 
Product5-amino-6-(5-phosphoribosylamino)uracil reductase 
Protein accessionYP_001403965 
Protein GI154150347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.301306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCC GGGTTATCGT GAACGTGGCA ATGAGCGCGG ACGGGAAGCT CTCGACCCGC 
GAACGCCGGC AGGTGAAGAT CTCCGGGAAC GAGGACTTTG CCCGGGTGGA CCGGCTCAAG
GCCGGGTGCG ATGCGGTGGC AGTCGGGATC GGGACTGTGC TTGCCGACGA CCCGTCGCTC
ACGGTAAAAA GCCCGGATCT CAGGGCGGAA CGGCAGCGTG AGGGGAGGCC GGAGCACCCG
GTCCGGGTTG TGATCGACGG CAGGGCACGG ACACCGCCGG ATGCTTCGAT CCTTGTCAAG
GGAGACGGGC TGCGGGTCAT CGCGGTCTCA GAGCGGGCCG ACCCGGCAAA GGTAGAAGCG
CTCCGGGCAA AGGCAGCGGT CATTACTGCC GGGAAAGACG AGGTGGATCT CTCCCGGGTG
CTTGACGAAC TGGGGCAAAT GGGCATCCGG AGCCTGATGG TGGAGGGCGG AGGAACACTG
ATCGCCGGGT TTATCCGGGC CGGTCTCGCA GACGAGATCT ACACCTACAT CGGGAGTATC
GTGATCGGCG GGAAAGACGC ACCGACACTT GCCGATGGCG GGGGCTGGAT CCGGGAATCG
GATTTCGCCC GGCTCGTGCT TGCGGATGTG ACCCGGATTG ACGATGGAGT GCTCCTCCAC
TGGATGGTAA AACGGACCTG A
 
Protein sequence
MRPRVIVNVA MSADGKLSTR ERRQVKISGN EDFARVDRLK AGCDAVAVGI GTVLADDPSL 
TVKSPDLRAE RQREGRPEHP VRVVIDGRAR TPPDASILVK GDGLRVIAVS ERADPAKVEA
LRAKAAVITA GKDEVDLSRV LDELGQMGIR SLMVEGGGTL IAGFIRAGLA DEIYTYIGSI
VIGGKDAPTL ADGGGWIRES DFARLVLADV TRIDDGVLLH WMVKRT