Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0804 |
Symbol | |
ID | 5410530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 773985 |
End bp | 774665 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640868028 |
Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
Protein accession | YP_001403965 |
Protein GI | 154150347 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.301306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCCCC GGGTTATCGT GAACGTGGCA ATGAGCGCGG ACGGGAAGCT CTCGACCCGC GAACGCCGGC AGGTGAAGAT CTCCGGGAAC GAGGACTTTG CCCGGGTGGA CCGGCTCAAG GCCGGGTGCG ATGCGGTGGC AGTCGGGATC GGGACTGTGC TTGCCGACGA CCCGTCGCTC ACGGTAAAAA GCCCGGATCT CAGGGCGGAA CGGCAGCGTG AGGGGAGGCC GGAGCACCCG GTCCGGGTTG TGATCGACGG CAGGGCACGG ACACCGCCGG ATGCTTCGAT CCTTGTCAAG GGAGACGGGC TGCGGGTCAT CGCGGTCTCA GAGCGGGCCG ACCCGGCAAA GGTAGAAGCG CTCCGGGCAA AGGCAGCGGT CATTACTGCC GGGAAAGACG AGGTGGATCT CTCCCGGGTG CTTGACGAAC TGGGGCAAAT GGGCATCCGG AGCCTGATGG TGGAGGGCGG AGGAACACTG ATCGCCGGGT TTATCCGGGC CGGTCTCGCA GACGAGATCT ACACCTACAT CGGGAGTATC GTGATCGGCG GGAAAGACGC ACCGACACTT GCCGATGGCG GGGGCTGGAT CCGGGAATCG GATTTCGCCC GGCTCGTGCT TGCGGATGTG ACCCGGATTG ACGATGGAGT GCTCCTCCAC TGGATGGTAA AACGGACCTG A
|
Protein sequence | MRPRVIVNVA MSADGKLSTR ERRQVKISGN EDFARVDRLK AGCDAVAVGI GTVLADDPSL TVKSPDLRAE RQREGRPEHP VRVVIDGRAR TPPDASILVK GDGLRVIAVS ERADPAKVEA LRAKAAVITA GKDEVDLSRV LDELGQMGIR SLMVEGGGTL IAGFIRAGLA DEIYTYIGSI VIGGKDAPTL ADGGGWIRES DFARLVLADV TRIDDGVLLH WMVKRT
|
| |