Gene Mboo_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0796 
Symbol 
ID5411579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp767064 
End bp768170 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content60% 
IMG OID640868020 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001403957 
Protein GI154150339 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.18226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA GGGTCTGGTT TGCAAGCCTC CGGGCGCGGT CGCCCGAGGA CAGTACCGAG 
GCAAAGGTCA GGAAGCTCTT TGAGACTGCC GGCCTTGCGG CATGTATAGA GCCGCGTGAC
AAAACGGCCA TCAAGCTCCA TTTCGGGGAG AAGGGCAATG ACTCGTACAT CAGCCCGGTT
TTTGTCCGCC AGATTGTCGA TAAGGTAAAG GCCGCAGGCG CCCTGCCGTT TGTGACGGAT
ACAAATACGC TCTATCTTGG GAGCCGTTCA AACGCGGTGG ACCACATCAC GACTGCGATC
CTCCATGGCT TCGATTACGC GGTGGTCGGG GCGCCGGTGA TCATTGCCGA TGGCCTTACC
GGGAAGAACA TGGCCCATGT GGCGATCAAC AAGAAGCATT TCAAGACGGT TACGCTTGCC
GGGGATATTG TCGCGGCAGA CAGCATGATC GTCATGACGC ATTTCAAGGG TCACGAGGTG
GCCGGCTTTG GCGGGGCCAT CAAGAACCTG GCCATGGGCT GCGCACCACC GGCGGGCAAA
CGGGCCCAGC ACCAGGCAAA GCCGTTTTCC ATGCCCGCGG TCTGTACCGG GTGCGGGAAG
TGTACCGAGG TATGCCCGAA ATCGGCGATC ACCCTCAGGA ACAAGAAATC GGTGATCGAT
AAGGACCTCT GCATCGGGTG CTTCGAGTGC ATGACGGTCT GCCCGGTGCA CGCGATCGAG
GTGGACTGGG AGACCGAGAT CCCGCTCTTT ACAGAACGGA TGGTCGAGTA CGCCTATGGG
GCGGTGCAGG GGAAGGCCGG GAAGATCGGG TACATCAGCT TCCTGACCCG GATTACGCCG
GACTGCGACT GTGTGCCCTG GAGCGATGCG TCCATTGTCC CGGACATCGG TATCCTGGCC
TCAAAAGATC CGGTGGCGAT AGATGCGGCA GCCTGCGATC TGGTCAACCA GCAGCCGGGC
TTTAAAGAGT CCCTCCTTGC CCGGCACCAC CACCCGGGCG AGGACAAGTT CAGTGGCCTG
CGGCCGAACA CGGATGGTCC GCGCCAGTTG CGGTACGCAG AGGAACTTGG TCTTGGCACC
CGGGACTACG AGCTGGTCCG GCTCTGA
 
Protein sequence
MTSRVWFASL RARSPEDSTE AKVRKLFETA GLAACIEPRD KTAIKLHFGE KGNDSYISPV 
FVRQIVDKVK AAGALPFVTD TNTLYLGSRS NAVDHITTAI LHGFDYAVVG APVIIADGLT
GKNMAHVAIN KKHFKTVTLA GDIVAADSMI VMTHFKGHEV AGFGGAIKNL AMGCAPPAGK
RAQHQAKPFS MPAVCTGCGK CTEVCPKSAI TLRNKKSVID KDLCIGCFEC MTVCPVHAIE
VDWETEIPLF TERMVEYAYG AVQGKAGKIG YISFLTRITP DCDCVPWSDA SIVPDIGILA
SKDPVAIDAA ACDLVNQQPG FKESLLARHH HPGEDKFSGL RPNTDGPRQL RYAEELGLGT
RDYELVRL