Gene Mboo_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0789 
Symbol 
ID5411572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp759894 
End bp762356 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content61% 
IMG OID640868013 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001403950 
Protein GI154150332 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.222821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAG GAACAAACGG GGGTTCTTTT CCCGTGGCGG ACAAGAAGAA CGCGGAACTC 
AAAATCACCG GGATGCACTG TGCCATGTGT GCTGCAGGGG TTGAAGAGGC ACTTGCAAAC
GTCAAAGAGG TCAAAAAGGC GCAGGTGAAC TTTGCAACCG AGACCGCCCG GGTGGAGTTC
GATCCGGACG TGGTCTCGAT CCACGAACTC GAAAAGGCCG TGCGTGACGC GGGATACGAT
GTAACCAACC GCGAGGTGAC GATCCGGATC GGGGGGATGA TGTGTGCCAC CTGCGTCCAG
ACCATCGAGG CAGCGCTCGC AGCGCTGCCC GGGGTTGTTT CGGCAAATGT CAACCTGGCA
AACGAGCAGG CCTATGTCAC CTATAATGCA TCGCTTTCCG GGATCGCGGA GATGAGGCAC
GCGATCGAGG ACGCAGGCTA CCAGTACCTC GGGATCGCAG GGGAGGTAAG CGACGAGGCC
GAAAAGGCGG CACGGGATGC CGACCTCCAT GACAAACTGC TCCGGTTCTC CCTTGGGTTT
GCCGTATCCA TCCCGCTCAT GATCCTGATG TGGGTGCCCA TTGGGATCCC TATGCAGATC
CTCGCGTACG GGATGCTTGT GGTCTCTACC CCGGTCTTTG TGTACGTGGC AGCCCCGATC
TTCCGGGCAG CATGGGGTTC GCTCAAAAAC CGGGTCCTCT CCATGGACGT AATGTACGCG
ATGGGCACCG GTGTTGCTTT TGTCGCAAGC GTGATGGGTA CGTTCTCGAT CGTTCTGACG
AGCGACTACA TGTTCTACGA CACCGCGATC ATGCTTGCCG CGTTTTTGAT GCTCGGGCGG
TACCTCGAGG CCCGGGCCAA GGGCCGGACC TCGGAAGCGA TAAAGAAACT CGCCGGCCTC
CAGGCAAAGA CGGCGACCGT GATCCGCGAG GGAAAAGAAG TCGAGGTGGC GATCGCGGAC
CTGGCGGTCG GCGATCTCGT GGTGGTAAAA CCCGGCAGCC GGATCCCGGT GGACGGCGAG
GTGGTATCCG GCGAGAGCTA CGTGGACGAG TCGATGATCA CCGGTGAACC GGTTCAGCCC
TTAAAAACAA AGGGAAGCAA AGTTGTCGGC GGCACGATCA GCACCAATGG CGTCCTCTCG
GTAAAAGCTG CCCGGATCGG GCAGGACACG GTGCTTGCGC AGATCATCCG CCTTGTGGAG
GAAGCGCAGG GGTCAAAGCC GCCTGTGCAG CGCGTCGCCG ACGTTGCGGT CACGTACTTT
ATCCCGGTAG TTCTCCTCAT CGCGGCCTCT GCGTTTGTCG TGTGGTACTT CGTGCTCCAC
GCAACCCTCC TGCTTGCCCT CACGGCGCTC ATCTCGGTGC TTGTGATCGC CTGCCCCTGT
GCGCTGGGCC TTGCCACCCC CACCGCAGTT ACCGTCGGGG TCGGGCGCGG GGCAGAACTG
GGGATCCTGA TACGGAACGG CGAAGCGCTC GAAACCGCAG AGAAAGTGAC CACGGTAATC
TTCGATAAGA CCGGCACGCT CACGAAGGGA AAGCCGGAGG TGACCGATCT GGTAGCCACC
GGGGTAACCC GGGAGACGCT CCTCTCCCTT GCCGCATCGG TGGAGAAGAA CTCGGCCCAT
CCGCTTGCGC AGGCCGTGGT CCGGGCCGCA GAGCAGCGGC ATGTTGCCCT TGAACCGGCA
GAGAAGTTCG ATACGATCGG GGGCAGGGGA GTCATGGCCG AAGTGCTGGG CGAGCCGGTG
ATTGTGGGCA ACCGGGCCCT GATGCAGGAC CGGGGCATTG CAGTGCCGGC CGATCTTGAG
GCCCGGATCA GCGCGTTCGA GCAGGACGGA AAGACAGTCG TGCTCGTGGC CTCCTCCGGC
GGGCTTGCCG GGGCGATTGC AATCGCCGAC ACCCTCAAGG AGACAAGCAC AGAGGCGGTC
CGGCGCTTTA AGGCGCACGG CCTTTCAACC CTGATGGTGA CCGGGGATAA TCCGCGGACG
GCAGAGGCCA TTGCCCGTAT GGTCGGTATC GACCGGGTGG TGGCAGGAGT ACTGCCGGAT
CAGAAAGCAG CCGAGGTAAA GGCCCTGCAG GCCAAAGGCG AGGTCGTTGC CTTTGTGGGT
GACGGGATCA ATGATGCCCC GGCGCTTGCG CATGCCGACG TGGGGATTGC AATCGGGAGC
GGGACCGATG TGGCCCTCGA GAGCGGGGAG ATCGTGCTTG TGCGTGACGA CCTGCTTGAT
GCGGTGGCGG CGCTGGAACT CTCGAAAAAA GTGATGGGAA GGATCCGGGG AAACATCTTC
TGGGCCTTTG CCTACAATGC CGCACTCATA CCGGTAGGGG CCGGCATCCT CTACCCTTTT
ACCGGCTACA TGTTCCGCCC GGAGCTTGCC GCCCTTGCCA TGGCCGCAAG CTCGGTCACT
GTTGTTACCC TCTCACTCCT CCTCAAAGGG TATATACCGG AAGCAAAGAA GATCGATCAT
TAG
 
Protein sequence
MQAGTNGGSF PVADKKNAEL KITGMHCAMC AAGVEEALAN VKEVKKAQVN FATETARVEF 
DPDVVSIHEL EKAVRDAGYD VTNREVTIRI GGMMCATCVQ TIEAALAALP GVVSANVNLA
NEQAYVTYNA SLSGIAEMRH AIEDAGYQYL GIAGEVSDEA EKAARDADLH DKLLRFSLGF
AVSIPLMILM WVPIGIPMQI LAYGMLVVST PVFVYVAAPI FRAAWGSLKN RVLSMDVMYA
MGTGVAFVAS VMGTFSIVLT SDYMFYDTAI MLAAFLMLGR YLEARAKGRT SEAIKKLAGL
QAKTATVIRE GKEVEVAIAD LAVGDLVVVK PGSRIPVDGE VVSGESYVDE SMITGEPVQP
LKTKGSKVVG GTISTNGVLS VKAARIGQDT VLAQIIRLVE EAQGSKPPVQ RVADVAVTYF
IPVVLLIAAS AFVVWYFVLH ATLLLALTAL ISVLVIACPC ALGLATPTAV TVGVGRGAEL
GILIRNGEAL ETAEKVTTVI FDKTGTLTKG KPEVTDLVAT GVTRETLLSL AASVEKNSAH
PLAQAVVRAA EQRHVALEPA EKFDTIGGRG VMAEVLGEPV IVGNRALMQD RGIAVPADLE
ARISAFEQDG KTVVLVASSG GLAGAIAIAD TLKETSTEAV RRFKAHGLST LMVTGDNPRT
AEAIARMVGI DRVVAGVLPD QKAAEVKALQ AKGEVVAFVG DGINDAPALA HADVGIAIGS
GTDVALESGE IVLVRDDLLD AVAALELSKK VMGRIRGNIF WAFAYNAALI PVGAGILYPF
TGYMFRPELA ALAMAASSVT VVTLSLLLKG YIPEAKKIDH