Gene Mboo_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0768 
Symbol 
ID5410708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp737192 
End bp738520 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content61% 
IMG OID640867991 
Productamidohydrolase 
Protein accessionYP_001403929 
Protein GI154150311 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0368346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC AGGAATCAGC AGATATCTTT GGGAACAACA AATCGATTCT CATCACTAAC 
GTAAACGACG GCACCGGGCC GGTAGACATC TTCATTGACG CAGAAGAGAC AATCTCCGAT
ATCGGCTGCG AGATCCGCAA GCGCCACCGG GGCGAGGCCG AGTTTATCGT GGACGGGGCC
GGGGCGCTTG CGCTGCCGGG CCTTTCCAAC ACCCACACCC ACGCGGCCAT GTCGCTTCTC
CGGGGCTATG CTGACGACAT GATCCTGCAG GACTGGCTGG CGCAGAAGAT CTGGCCGCTT
GAGGCCCACC TGACCGCAGA TGATGTGTAC TGGGGGACCC GGCTTGCCTG CCTTGAGATG
ATCCGGACCG GCACCACTGC GTTTAACGAC ATGTACTTCT TTATGGAGTC CGCGGCAAAG
GCCGTGGACG AAGCCGGGAT CCGGGCCCTG CTCTGCTATG GTTTTATCGA TCTGGGTGAT
GCGGAGAAAC GGGAGCGCGA GTGCCGGGCC ACCGAAGCGC TGGTTGCGCA TATACGGGGC
CTGAAAAACT CCCGGATTCA CGCCGCAGCA GGCCCGCATG CCCCATACAC CGTCTCACCC
GAGGGCCTGA AATGGTGCGG GGAATTTTCC CGCGAGCAGG ATATCCCCGT TCATATCCAC
CTGTCAGAGA CAGAAAAAGA AGTAAACGAC TGCGTTGCCC GGCACAAAAA ACGGCCGGCA
GCACTGCTCG ACGAGTGCGG CCTTCTCTCC CCCCGGACCA TCGCGGCACA CGGGTGCTGG
CTTGATGATG CAGAATGTGC ACTTCTCGGG AAACGCGGGG TAAGCGTCTC CCACAACCCG
GCAAGCAACA TGAAGCTTGC CACCCACCGG GCACTGCCTT ACCGGGAGCT CGTGGCTGCA
GGGGCAAACG TCTGCCTTGG GACTGACGGC TGTGCCTCGA ACAACAACCT CGACCTCTTT
GAAGAGATGA AGATCGCAGC GCTCCTCCAG AAGTTCTTCT GGAACGATCC TACCGTCCTT
GCGGCACCGG AAGCGCTTGG TATGGCAACC GCAAACGGGG CAAAGGCGCT CGGGTTTGGC
GACGGGGCGC TTGTGGCAGG GGCACCGGCC GATCTCATCC TTGTCACCAC CCGCACCCCC
GCAAACACCC CGCTCCATAA TGCCGCTTCA AACCTTGTCT ATGCCTGCAG CGGATCTGCC
GTGGAGACCA CCATCTGCAA TGGCCGGGTG CTTATGTTCG ACCGGGAGAT CCCGGGCGAG
GAGAAGGTCC TTGCGGAGGC TGCCGGTGCA GCCGCACGAC TGGTGAGACG TGCGCAGACT
CCTTCCTGA
 
Protein sequence
MTTQESADIF GNNKSILITN VNDGTGPVDI FIDAEETISD IGCEIRKRHR GEAEFIVDGA 
GALALPGLSN THTHAAMSLL RGYADDMILQ DWLAQKIWPL EAHLTADDVY WGTRLACLEM
IRTGTTAFND MYFFMESAAK AVDEAGIRAL LCYGFIDLGD AEKRERECRA TEALVAHIRG
LKNSRIHAAA GPHAPYTVSP EGLKWCGEFS REQDIPVHIH LSETEKEVND CVARHKKRPA
ALLDECGLLS PRTIAAHGCW LDDAECALLG KRGVSVSHNP ASNMKLATHR ALPYRELVAA
GANVCLGTDG CASNNNLDLF EEMKIAALLQ KFFWNDPTVL AAPEALGMAT ANGAKALGFG
DGALVAGAPA DLILVTTRTP ANTPLHNAAS NLVYACSGSA VETTICNGRV LMFDREIPGE
EKVLAEAAGA AARLVRRAQT PS