Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0761 |
Symbol | |
ID | 5411100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 730548 |
End bp | 731210 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640867983 |
Product | endonuclease III |
Protein accession | YP_001403922 |
Protein GI | 154150304 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.169913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAC AGGACGCAAA AAAAATCTAT TCTGCCCTTC TCAAGCGTTA TCCGCGTGCC CGCGAGTCGC CGACCACGAT CTGCCGTGGC ACGCCTTTTG AGGTGCTCAT CCTTACCATC CTCTCCGCCC AGACCACAGA CAAAGCCGTC CTCCAGGTAA AAGAGCCGCT CTTTTCCGCG TACCCGTCAC CCCATGCCCT TGCCCGGGCA AATCCCGCCG ATGTCGAGCC GATCATCCAC AGCCTCGGGT ATTACCACGC AAAGGCAAAG CACATTGTTG CGGCGGCCGC ATCCGTGGAA AACGAGTTCG GCGGTGAGGT GCCACGGACT ATGGACGAGC TGCTCTCCAT CCCCGGGGTG GGCCGGAAGA CCGCAAATAT TGTGCTGTAC CATGGTTTTG GCCAGAACCA CGGGATTGCG GTGGATACCC ACGTGCGCCG GCTGGCACAG CGGATCGGGA TCTCGGACAC CGATGACGTG AAGGTGATCG AGCAGGATCT CATGGCCCTC TACCCGAAAA AGGACTGGGG CGACCTTACC GACGTATTCA TTGCCCACGG GAGGGCAACC TGTGATGCCA GGAAACCGCT CTGCGGTGAC TGCGTGATCC GGAAGTACTG CCGGTACTAC CGGGATTTAC CGGATGACCA AAAAAAGGAC TAA
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Protein sequence | MDAQDAKKIY SALLKRYPRA RESPTTICRG TPFEVLILTI LSAQTTDKAV LQVKEPLFSA YPSPHALARA NPADVEPIIH SLGYYHAKAK HIVAAAASVE NEFGGEVPRT MDELLSIPGV GRKTANIVLY HGFGQNHGIA VDTHVRRLAQ RIGISDTDDV KVIEQDLMAL YPKKDWGDLT DVFIAHGRAT CDARKPLCGD CVIRKYCRYY RDLPDDQKKD
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