Gene Mboo_0761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0761 
Symbol 
ID5411100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp730548 
End bp731210 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID640867983 
Productendonuclease III 
Protein accessionYP_001403922 
Protein GI154150304 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.169913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC AGGACGCAAA AAAAATCTAT TCTGCCCTTC TCAAGCGTTA TCCGCGTGCC 
CGCGAGTCGC CGACCACGAT CTGCCGTGGC ACGCCTTTTG AGGTGCTCAT CCTTACCATC
CTCTCCGCCC AGACCACAGA CAAAGCCGTC CTCCAGGTAA AAGAGCCGCT CTTTTCCGCG
TACCCGTCAC CCCATGCCCT TGCCCGGGCA AATCCCGCCG ATGTCGAGCC GATCATCCAC
AGCCTCGGGT ATTACCACGC AAAGGCAAAG CACATTGTTG CGGCGGCCGC ATCCGTGGAA
AACGAGTTCG GCGGTGAGGT GCCACGGACT ATGGACGAGC TGCTCTCCAT CCCCGGGGTG
GGCCGGAAGA CCGCAAATAT TGTGCTGTAC CATGGTTTTG GCCAGAACCA CGGGATTGCG
GTGGATACCC ACGTGCGCCG GCTGGCACAG CGGATCGGGA TCTCGGACAC CGATGACGTG
AAGGTGATCG AGCAGGATCT CATGGCCCTC TACCCGAAAA AGGACTGGGG CGACCTTACC
GACGTATTCA TTGCCCACGG GAGGGCAACC TGTGATGCCA GGAAACCGCT CTGCGGTGAC
TGCGTGATCC GGAAGTACTG CCGGTACTAC CGGGATTTAC CGGATGACCA AAAAAAGGAC
TAA
 
Protein sequence
MDAQDAKKIY SALLKRYPRA RESPTTICRG TPFEVLILTI LSAQTTDKAV LQVKEPLFSA 
YPSPHALARA NPADVEPIIH SLGYYHAKAK HIVAAAASVE NEFGGEVPRT MDELLSIPGV
GRKTANIVLY HGFGQNHGIA VDTHVRRLAQ RIGISDTDDV KVIEQDLMAL YPKKDWGDLT
DVFIAHGRAT CDARKPLCGD CVIRKYCRYY RDLPDDQKKD