Gene Mboo_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0720 
Symbol 
ID5410005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp687393 
End bp687782 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content48% 
IMG OID640867940 
ProductDNA binding domain-containing protein 
Protein accessionYP_001403881 
Protein GI154150263 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.60238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0504983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGG CAATAAAGGG AATCATTGGT AATGTAGTTA TGACCACAGA TACACAGTTT 
CTGAGTACGA AAGAGGTGGC GGTGATCCTT GGTGTCCACC AGAAAACCGT CCATATCTGG
CTCCGTACCG GAAGGCTTGC AGGAACAAAA ATATCCTATC GTGCCTGGCG GATCTCCCGG
GCCGCACTGG ATGAGTTTAT CGAAAAGAAC AGCAATATTC CACAAAAGAA AGGACACTCG
GCATCCGACA ACGCTGCCAG TCAATCCCGC TCCCAAAGCA CAAATGAAAG CATACCCACC
CCAACAGATG GCAATATCCC TGAGGCCAAG ATGAAACATT ATATCCGGGA AATAATGGGG
GAAACAAACA CTCCCCCAGA CAACGTATAG
 
Protein sequence
MIMAIKGIIG NVVMTTDTQF LSTKEVAVIL GVHQKTVHIW LRTGRLAGTK ISYRAWRISR 
AALDEFIEKN SNIPQKKGHS ASDNAASQSR SQSTNESIPT PTDGNIPEAK MKHYIREIMG
ETNTPPDNV