Gene Mboo_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0716 
Symbol 
ID5411618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp682107 
End bp682922 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID640867936 
Producthypothetical protein 
Protein accessionYP_001403877 
Protein GI154150259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0592782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0503342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA ACAGCCAAGA TGTGATCAAT AAATACAAGA AATTCAAAAA AGTCGACGGC 
GCCACATACC GAAAAGTAAA CCAGTTTCTG CGCAAACGTA CCTATATCAC GGCCCGAGAA
TGGGCGCTGG CCCGGTTGTG CACGGACTTT CGGACGTCCG GAGGGGCTGA AATGACCTTT
ATCGGGAGAC ATCTCCCGGA ACTGGTCCCC TTCATGGAGG AACAGTACTC TCCCCAGGCT
GTGAACCAGG CACGCCATTC ATTCAAGAAA AAAGTACGAA AAGCAAGCGC CACCTTTTTC
TACGGGGCAA TGTGCGGATT CTTTACCACG GACGAACTCG ATGACCTCCT CTTTGAGGCA
AGCGAAGTTT CACGATTTCT TCTGGAGGTT GAAGGAACGA CACTGGATAT CGATGAGGAG
ATTGATATCG AGGACAGGAT CACCAGAGTT ATGCGAAGCG TCGGGGAAAC CGCAAAGACG
ATCCTCACTC AGAGAACCGA AAATACTCAT ACTGATGAAG AGGATACCCC CTCAGAAAAT
CCTAAAGAAC CTCATGACAA GGAGACAAGA TTTCCTGAAA CAAACAAGCC GCCCAACCCA
GAAAATTCTC CTGTTCTTCA GCCAGAGGAT AACGCAGTCG AATTCCCTAC TCGTCCAGAT
CAGATGGCAA AAACACAGTC ACAGTCTCCC CGACAGAATG GACATGAACT CTTCACAACC
ACTCAGGCTA TCCCCTCTTC ATACCCTGAT GAAAAAAATT CTGATACTCT TTCGATGAAC
TCCTCCGGGA ACACCAACGA GGGTTTACAA CCATGA
 
Protein sequence
MEDNSQDVIN KYKKFKKVDG ATYRKVNQFL RKRTYITARE WALARLCTDF RTSGGAEMTF 
IGRHLPELVP FMEEQYSPQA VNQARHSFKK KVRKASATFF YGAMCGFFTT DELDDLLFEA
SEVSRFLLEV EGTTLDIDEE IDIEDRITRV MRSVGETAKT ILTQRTENTH TDEEDTPSEN
PKEPHDKETR FPETNKPPNP ENSPVLQPED NAVEFPTRPD QMAKTQSQSP RQNGHELFTT
TQAIPSSYPD EKNSDTLSMN SSGNTNEGLQ P