| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0713 |
|---|
| Symbol | |
|---|
| ID | 5411615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 676480 |
|---|
| End bp | 680043 |
|---|
| Gene Length | 3564 bp |
|---|
| Protein Length | 1187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640867933 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403874 |
|---|
| Protein GI | 154150256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.512203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.122277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTAT CCGGCCTGGT TACTGAACGA ATTCGTCAAA GGCTTGCCTC CAAAGACTGG
GAGGGCATTG ATACTCTTGT TTCCGATTCG GCACATTTTA AAGAGAGGAA AGCCCGGGCG
TTGATGTATC AGGCACTGAA TGCAACCATC CTTGATTATG CCTTTCAGCA CAATTCCCCG
GAGGTGCTAG TTGCAATCAG GACGATTCCA CCAGATGGAG CTGAGGAGTT CTTCTCGCGG
CTTGTAAAAC AATATACGAA ATCGGGGAAT AGAGGATGGC TCGACGGCAT TTTTATTCTT
GCGGAAAAAC TGGGGAAAAA AAGTCTGAAA TCGAAAATAA TAGCCGGCAT TGTTCAAAAC
CTCATTTCAG CAGGTATTGA AGAGGCTAAT CCCCTATTTA TTGAAACCGG TATTGCAAGC
CTCAATAAAA TCTCATTTAG AAAATACCGG TCAGAATGTA CAACCGAAGC TGCATCCAGA
CTCACCAGAT GGGCCCTCCA GAAGGGGAAC AATACCCTGC TCTGTGAAAT CTATGATCTT
ACCAATGAGG TCACCGATAT TTCAAAACGA GCAGCACTTC ATGCAGAAAT AACGGAGGCT
CTTGCAACAA ATGCCGTGAA AACGGAAGAT TTGAACCTTC TTCTGAAGAG CTTACACTTA
ACTGCCCAGA TACACCAGAA GATTCGAAGA CGGGCATGCA TGGATCATAT CATAGGTCTG
GGAATGCGAT CTTCGCTGGT AAAAGATCTT ACCGATGTCC GCCTCCTTAT TCCCCGATTT
GAGGATCTTT TACCTGAAAT TCAGGGTGAG CTGATTGATT CCCTGACTGA ACAATTCCTG
GAGCGGATAA AAAATAAAAG TCAAATTCTG GAAAATCTTC TTTTTCTCAG AGCAAAATTC
CCTTTTATCC AGGAAAATCT CGTTCAAAAT CTTCTTATTA AGGCGGAGCG TTCCGGTGAT
TCATGGTACC TGACTACTGC AATAGGATTT ATCCAAGAAT TCCAATCGGA AGAAAAGGTT
CCGGTACGAG AGATCATCCG GGCGGGCATA GGTATTGCGC GGCGTACCCG CTCAACCTCA
ATTATCGGAC AGCTGATTCC ATTTGCCAAT GAATCCTGCA GCCATAGCGA GCTAACGGAA
ATCTATCTGC AATTTGTAAG CGTTATGCTC GAACTGGAAG CTTTTGAGCA AGCTGCCGCA
CTGTTTTCAC AGATCACTCC GGATCATGAG AGGATGCCCC AGTATACATT CTGCCTTGCC
CACATGCTCA AAATGGGAAT AACACTGGAA TTGGGTTCCG CCCAGTTCCG TGAAATCCTG
GAAAACAGTA CTCCCGATAA CGTCTCTCTT GCTGTTTCCC TTGCAATGCG CGAGATGGGA
CAAAATACCT CGTTTGAGGA GATTGCAAAA CACGGTGATT CCTTAAAGCG GCTCCTTGAT
CTCAATGACA GAACAGATTC TGTGATCACT GATTTTATCA TGACTCTGAC ATCCAGAGGC
TTCCTTGATT CGTTTGATGC ATTATTTCTC GTGGATCTCG CAAAAAGGAT CCGGACTACG
TCTGCCCGTG AAGAAGCAAT GTCAACAGTG GTCATGAAAC TGGCAGAAAT CGGAGTGAGA
ACCAAAAACC GCGATATTCT CCAGCAGGCC GTTGGCATCA CTTGCATGAT AGAAGGGGAA
AATATCCGGT CATCGACACT GAGCAGTATT ATTGACGATG CAGCCCTTCT TGCAGCAACA
CAAGGAGATC TTGATCTTCT CTTACGAATG AGGATCTGGA GTTCCGCATT TTTGGACAGC
AGCATCGTCA CATACGCGAT AAAAAATATC GTTGACGGAG TAATAAAATA TGCTCTCAGC
AAACGGGACC CCGATGCCCT CGAAGAAGCA TATCGTATTG CGCAGGATAT TGAGGACCCG
GCATTAAGGA TACAAATAAG CGAGCGGATT GCAGAATCAT TTGTCAGAAT TGGGTGCATC
CGCATACAGA ACGCCACCGA GGGGCAGAAA AACCATGCAG ATCACGATGC TCTGTTACAT
CCCTTCAGGA AAAGTCTGCA GCTTTTGAAA GCCGAAGTGA AAAAACCCCG TATATCACTA
AAAATTGCAG GGATGATCGA TATCATCCTC TCCTTTTCGA AAAAAAGTAC CGATCGGGAC
TTTGTCCTTC CCTTAGCTTT GTATGCCCTC GAGATTGACG ATCCCTTAGA GCGCAATGCC
ATGATGCTGC GGATAATTGC CAAACTGGGA GAAGATATCG TGTATCCGGA TTCGGCAGAT
CCCTACGAAA TACTGGCATA TATTCTCCAG AATCGGTACA ACGTGCGATC AACCCCTGCA
ATCATTATCC TGATACACCA CCTTCTCGAT CTCATTCAAA ACCCCTTTAT CCGTTTGAAA
GGACTGTGTG CACTTGCCGA ATCAACTCTT ATAATACACG ATGAGCAGGG GTGCCAAAGA
ATGCTCTCCG AGGTAACCGA CGGCGTAAGC AGTCTTCCCA CGGAGCATGA GAAGATCCTG
ATACTCGCAG AACTGACTGT CGGGTACCAT GATATTGATC CGGAGATGGC GCAAAAATGT
CTACAGGAAG GATTAGATCG CCTGCACAAT GTGGAACCTG ACCAAAGTAC CCTCGTCCAC
AGGAAGATGG TAGCAGCAAT AGTCCGGGCA GGCGATCTCC TTCCGGAGAA GACCCGCTTG
AGTCTGATTC TGGAAATTAT TGCCGATATC TCAGATCCCA TAGAGTATGT AACTGCACTC
ATTTCCGCCT ACACCCTTGA TGGAGAGGAT CAGGGAAGAA GTACATTGCG TCATATTTCA
GAATCACTTG AAAAAATCGA TTCACCCTAT AATCAGGCAC TGCTCACTCT CAAACTGATA
CCGCTTGCTG TAAGGAAAGG GGAGATCGCA TTTGCACTTG ATCTTCTTAA CCGCGCAGAA
CAATTGTCAG AAACGATAAA TGTTCAGCAT GTAGCCGATT CCATCCGTGA CGAAGTTGCA
CGTATCCTGG AAGATCTCTT CCGAATGCAG GGAGATGAAC GATATCTGAA AAAATCTGCA
GAGATCCTTG CATTGATAGA AGATGATCAG CTTCGGCAGG ATAGCCTGGC CCGGATTGGA
TGCGAAGATA CAACGGAAAA GAATCTGCCC TCTACAAAGA TCATGGCAAC TATGACCCGG
CTTATTGACA CCGGTGCCCC GCCGGGCCAG ATTGCATCAC TCGAACAGAC AGTTCATGCA
GTTCCTGATC GAGGGAAACG GGCCCTTATA TACTGCCGTC TCTCCATTCT CTTCCGTGAA
AACGGTGAGA TTAAAACAGC GAGACGAATG TTGCAGAACG CGATAAATGA GTCGGAGATC
ATCAGGCCAC TCTCAAAAAG AGCATATATA CGATGCGACA TGGCAATAAA AATGTTCACT
GCGGGATACG AGAGTGTTGC GCAGGATATT CTCGACCAGG CAATTGATGC CGCCACAAAT
ATCCGGCAAT CGATCTTAAG AGACGAAGTC TTCAATGAGC TGGGAATGGC CATACGAATA
CTCCAGGGAG GTGAACCGGA ATGA
|
|---|
| Protein sequence | MLLSGLVTER IRQRLASKDW EGIDTLVSDS AHFKERKARA LMYQALNATI LDYAFQHNSP
EVLVAIRTIP PDGAEEFFSR LVKQYTKSGN RGWLDGIFIL AEKLGKKSLK SKIIAGIVQN
LISAGIEEAN PLFIETGIAS LNKISFRKYR SECTTEAASR LTRWALQKGN NTLLCEIYDL
TNEVTDISKR AALHAEITEA LATNAVKTED LNLLLKSLHL TAQIHQKIRR RACMDHIIGL
GMRSSLVKDL TDVRLLIPRF EDLLPEIQGE LIDSLTEQFL ERIKNKSQIL ENLLFLRAKF
PFIQENLVQN LLIKAERSGD SWYLTTAIGF IQEFQSEEKV PVREIIRAGI GIARRTRSTS
IIGQLIPFAN ESCSHSELTE IYLQFVSVML ELEAFEQAAA LFSQITPDHE RMPQYTFCLA
HMLKMGITLE LGSAQFREIL ENSTPDNVSL AVSLAMREMG QNTSFEEIAK HGDSLKRLLD
LNDRTDSVIT DFIMTLTSRG FLDSFDALFL VDLAKRIRTT SAREEAMSTV VMKLAEIGVR
TKNRDILQQA VGITCMIEGE NIRSSTLSSI IDDAALLAAT QGDLDLLLRM RIWSSAFLDS
SIVTYAIKNI VDGVIKYALS KRDPDALEEA YRIAQDIEDP ALRIQISERI AESFVRIGCI
RIQNATEGQK NHADHDALLH PFRKSLQLLK AEVKKPRISL KIAGMIDIIL SFSKKSTDRD
FVLPLALYAL EIDDPLERNA MMLRIIAKLG EDIVYPDSAD PYEILAYILQ NRYNVRSTPA
IIILIHHLLD LIQNPFIRLK GLCALAESTL IIHDEQGCQR MLSEVTDGVS SLPTEHEKIL
ILAELTVGYH DIDPEMAQKC LQEGLDRLHN VEPDQSTLVH RKMVAAIVRA GDLLPEKTRL
SLILEIIADI SDPIEYVTAL ISAYTLDGED QGRSTLRHIS ESLEKIDSPY NQALLTLKLI
PLAVRKGEIA FALDLLNRAE QLSETINVQH VADSIRDEVA RILEDLFRMQ GDERYLKKSA
EILALIEDDQ LRQDSLARIG CEDTTEKNLP STKIMATMTR LIDTGAPPGQ IASLEQTVHA
VPDRGKRALI YCRLSILFRE NGEIKTARRM LQNAINESEI IRPLSKRAYI RCDMAIKMFT
AGYESVAQDI LDQAIDAATN IRQSILRDEV FNELGMAIRI LQGGEPE
|
|---|
| |