| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0703 |
|---|
| Symbol | |
|---|
| ID | 5411557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 666847 |
|---|
| End bp | 667875 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640867923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403864 |
|---|
| Protein GI | 154150246 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00303] conserved hypothetical protein TIGR00303 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.304347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAT CAGTATCCAT GGCATTCCTC ACCGGTGTAC CCAATTTCTC CGGGAAAAGA
CCTGCATTTT GTGTCATTCT GGGAAATACA CTGCTCTCAA CCATCCCCGG TATTTCCGGT
GCCGGTCCGA CACCGGAACA AACCCTGCTC ACCCCGAATC TTGATGCTGA ATTGGTCACA
AACGGTCGGA TTGCAAACCC GGATATTAAG CCAAATACCC CCACCGGGTG TCCAACTCCT
GCTACAATCA CCCGTGCTAT GATAGAACTG ACCGGTATTG CCCCGGTCTT TATCAATGCA
GGTTTGCATA ATCCTCTGAC CGTCCCGTAC CTGGATGCCT TGGGAAGCGT GGGAAACGAT
CCCCGGACCG GTGATGCCAT CCCCCGGGCC CACCAGATTT TTTCCCAAGG CAGGAATATT
GGGAAGATCC TGTCAGGAAT GGGAGACCTG CTGATTCTGG GAGAGTGCGT GCCCGGTGGA
ACCACAACAG CGCTCTGCGT TCTCCGGGCA CTCGGGTATC CTGCCGCTGT AAGCAGCAGT
TTTGTCGACA ATCCCCGTGA CCAAAAAGAG AGGATATGCC GGGAGGTCCT TACCGGCCTC
ACCCCGGAAA TGCGGCGCGA TCCCTTGGCC ATTGTCCAGC GTGTCGGCGA TCCAATGATC
CCGGTCGCGG TAGGTATTGC CAGCACATAC TCCGGAACCC TGGTGCTCGC CGGAGGAACC
CAGATGCTTG CCGTGTGTGG TGTGATCAAG GCAATGAACG GTCGCCTGCC TTCTGTGGCC
ACGACTGTTT ATGTTCGTGA CGACGGTTCG GCAAACGTGC AGGAACTTGC CGATATGATG
GGTGTAACCG TTTACTATGT TGATCCCACA TTTGGTGAGC TTGGTCACGA TGGACTCGCA
CGCTACTGCA CCGGGGAAGT CAAAGAAGGG ACCGGTGCAG GGGGAGCTAT GTTCATGGCC
TCAGTGATGG GATTTACCCC GGAGCAGATC AAGGATAAGA TCTATAATAC TGTGCTGGCT
TACCGCTGA
|
|---|
| Protein sequence | MILSVSMAFL TGVPNFSGKR PAFCVILGNT LLSTIPGISG AGPTPEQTLL TPNLDAELVT
NGRIANPDIK PNTPTGCPTP ATITRAMIEL TGIAPVFINA GLHNPLTVPY LDALGSVGND
PRTGDAIPRA HQIFSQGRNI GKILSGMGDL LILGECVPGG TTTALCVLRA LGYPAAVSSS
FVDNPRDQKE RICREVLTGL TPEMRRDPLA IVQRVGDPMI PVAVGIASTY SGTLVLAGGT
QMLAVCGVIK AMNGRLPSVA TTVYVRDDGS ANVQELADMM GVTVYYVDPT FGELGHDGLA
RYCTGEVKEG TGAGGAMFMA SVMGFTPEQI KDKIYNTVLA YR
|
|---|
| |