Gene Mboo_0694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0694 
Symbol 
ID5411548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp657474 
End bp658703 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content52% 
IMG OID640867914 
Producthypothetical protein 
Protein accessionYP_001403855 
Protein GI154150237 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.452898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.129497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAG GTATACTCGG AGGAGGCCTG ACCGGGCTGG TTGCTGCTCA TGCGTTAGCC 
GGAGAGCATG ATGTTCTCCT TTTCGAACAG ATGCCGTATC TGGGCGGTTG TCTCTCCTCA
TACCACATCG ATGATTACTG GATTGAGCGA TATTACCACC ATTGCTTTTC CGGCGATAAA
CAACTGTTTA GTCTCCTTGG AGAACTTGGC CTGCTGGAAA AACTGGAATG GTGGTCAGGG
AGTACCGGTT ACTTTTCGGG AGACACTCTC TACCCACTCA CGACGCCATT ACAAATCCTG
CGCTGGCCGG AACTTTCCCT CATCGATAAA ACAAAACTGG CCCTGTTAAC GCACCGTGCA
GGGAAAATGG ATCCTCTCGC ACTCGATGAT ATCCCGGCTG AAACATTTAT CATTGATAAT
CTGGGCCACC GCATCTATAC CTCGTTTTTT GAACCGCTCC TGCGAAGCAA ATTCGGAAAG
AACCGGAGCA AGGTATCTGC AGCCTGGTTG ATCAGCCGTA TCGCCATCAG GTCGAACAGG
GGAGTACATG GGGAACGTCT TGGCTACCTG AACGGGGGGT TTCACCAGAT TATTGACCAA
TTGGAAAAAT CTATCGGAAG TAAAAGAGGG AAGATCAATC TGCAGACCCC GGTCACGTCC
CTTTCGAAAA ATGGCAACCG ATGGAATGTC AATGATGAAA TCGTGGATGC AGTCGTTTCC
ACGATCCCCC CTCAGGAGCT GGGATCCTTG TCCGGCCTTA CCCTTCCGGA GATTCCCTAT
CAGGGCGCGG CCTGTATGAC CTTAGGATTC GAACGTGATG TGTGCAGGGG CGTGTATTGG
ACCAACATGA AAGATGAAGG CCCGTACGGA GCGGTAGTTG CACATACCAA TCTGATCCCG
CATGAACGGT ACGGTGAGCA TATCGCGTAT CTGGCATCGT ATTTCAGTGG CAGTGTTCCT
GCGCGGCTCG ACCAGAAGAT GAAAGAGGAT TTCTGTTTGA GATTTGGCCT TGCAGAAAGG
GAAATCCACT GGAGCCGGAT GGCCATCGAT CCCTGGGCGG GCCCGGTGTA TACGACGGGA
TACCGATCCC TGATCCCTGC CTGCGAAAAG CATGGTATCT TCCTTGCAGG CATGTTTTCG
GAAGAGAATT ATCCGGAACG AAGCATTGAA GGATCTGTCC GGGCAGGCAA CCGGATTGCA
AAATGCATTC AGGAGAGAAC GCACCGATGA
 
Protein sequence
MKIGILGGGL TGLVAAHALA GEHDVLLFEQ MPYLGGCLSS YHIDDYWIER YYHHCFSGDK 
QLFSLLGELG LLEKLEWWSG STGYFSGDTL YPLTTPLQIL RWPELSLIDK TKLALLTHRA
GKMDPLALDD IPAETFIIDN LGHRIYTSFF EPLLRSKFGK NRSKVSAAWL ISRIAIRSNR
GVHGERLGYL NGGFHQIIDQ LEKSIGSKRG KINLQTPVTS LSKNGNRWNV NDEIVDAVVS
TIPPQELGSL SGLTLPEIPY QGAACMTLGF ERDVCRGVYW TNMKDEGPYG AVVAHTNLIP
HERYGEHIAY LASYFSGSVP ARLDQKMKED FCLRFGLAER EIHWSRMAID PWAGPVYTTG
YRSLIPACEK HGIFLAGMFS EENYPERSIE GSVRAGNRIA KCIQERTHR