| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0687 |
|---|
| Symbol | ndk |
|---|
| ID | 5411663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 652409 |
|---|
| End bp | 652861 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640867907 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_001403848 |
|---|
| Protein GI | 154150230 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.36763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA CCTTTGTGAT GATCAAGCCG GACGGTGTCC AGCGCGGGCA GGTCGGCGGG
ATCGTCTCCC GGTTTGAGGC AAAAGGTCTC AAGCTCGTGG CAGCCCGGTT CGAGGTATTG
CCCGAGAGCC GGGTTATCGA GCAGTACCAG GAACACCTGT CAAAACCGTT CTTCCCGTCA
CTCAAATCCT ATATCAGGGG AGGCCCGTGC TTCCTGATGG TCTGGGAGGG CAGGAATGTG
GTTGCCATTG TCAGGAAAAT GATCGGTGCC ACAAATCCCC AGGAGGCAGC TCCCGGAACC
ATCCGGGGCG ATTTCGGGAT AGACATCGGA AGGAACGTGA TCCACGCTTC CGATTCTCCC
GAGAGTGCCG CACGGGAGAT CGGCATCCAC TTCAAACCGG CTGAACTGTT CGCATACACC
CGGGTTGACG AATCCGTGGT ATACGAATAC TAA
|
|---|
| Protein sequence | MDRTFVMIKP DGVQRGQVGG IVSRFEAKGL KLVAARFEVL PESRVIEQYQ EHLSKPFFPS
LKSYIRGGPC FLMVWEGRNV VAIVRKMIGA TNPQEAAPGT IRGDFGIDIG RNVIHASDSP
ESAAREIGIH FKPAELFAYT RVDESVVYEY
|
|---|
| |