Gene Mboo_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0683 
Symbol 
ID5411659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp649425 
End bp650630 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content56% 
IMG OID640867903 
Productthreonine synthase 
Protein accessionYP_001403844 
Protein GI154150226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.761513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCATC TCGTGTGCGT TCACTGCGGT GCCACGTATT CCGCTGACGA GATCCTCTAT 
AACTGTAAAA AATGCGGTCA CCTGCTCGCG GTAAAATATC CTCTTGATAC AATAACCGTG
AAGCGTTCCA CCTGGGACGC CCGCCCGCTC TCGGTCTGGC GCTACAAGGA GCTCCTCCCG
GTGCATATTG AGCCGGTTTC CCTGCAGGAA GGAGGTACCC CCCTCTACCA CTTAAAACGC
CTCGGGGAAG AGATGGGGCT GAAGCACCTT TATGCGAAAC ACGAAGGGAT GAACCCGTCG
GGCTCTTTTA AGGATCGCGG GATGACCGTG GGCGTCTCCA TGGCAATCCA GCTCAAGAAG
AAGAGCGTTG CCTGCGCAAG CACCGGGAAT ACCTCGGCAA GCCTTGCAGT CTATGCCGCA
AAAGCCGGGA TCCCGGCAGT CGTGCTTCTC CCTGCGGGAC ACGTTGCTGT CGGAAAGATT
GCCCAGGCAC TGATGCACGG TGCAAAGGTT ATCTCGATCC GGGGCAATTT CGACCGTGCA
CTCGAGATGG TCCACGATCT CTGCCTCACG CATGGGCTCT ACCTCTTAAA CTCGATCAAT
CCCTACCGGC TGGAGGGCCA AAAGACGATC GGGTTTGAGG CAATCGATCA GCTGGGATGC
GTCCCCGACA GGATTGTCCT CCCGGTAGGA AACGCTGGAA ATATTTCCGC GGTGTACAAA
GGGCTGCTGG AACTTGAGGC ACTGGACTTT ATCAATAGCC TGCCAAAAAT GACCGGCATT
CAGGCCACCG GTGCAAGCCC TGTCGTCAGG GCAATAAAGG AGAACCTGCC CGTTGTCCAG
ACCGAGGAGA ATCCCGAGAC CCTTGCCTCA GCAATCCGGA TCGGTGCACC TGTAAATGCA
GAGAAGGCGC TTGTTGCAAT CCGTAAGACC GGAGGAACAG CCGAATCGGT GACTGATGAT
GAGATCCTTG CGATGCAGCG CGATCTCGCA CGCAAGGAAG GAATCGGCGT GGAACCTGCA
TCTGCCGCAT CAGTGGCCGG CATCCGCAAG CTCGTAGAGA TGGGTGCGAT CGACCGCGAT
GAGAAGATTG TCTGTGTGGT GACCGGTCAC CTCTTAAAAG ACCCGGAAAC AGTGATTAAA
CAATGCGAAC CCCCAATCGA GATCGATGCG GACCTGCCCT CGCTGCTCTC TGCGTTGCAC
TTGTGA
 
Protein sequence
MYHLVCVHCG ATYSADEILY NCKKCGHLLA VKYPLDTITV KRSTWDARPL SVWRYKELLP 
VHIEPVSLQE GGTPLYHLKR LGEEMGLKHL YAKHEGMNPS GSFKDRGMTV GVSMAIQLKK
KSVACASTGN TSASLAVYAA KAGIPAVVLL PAGHVAVGKI AQALMHGAKV ISIRGNFDRA
LEMVHDLCLT HGLYLLNSIN PYRLEGQKTI GFEAIDQLGC VPDRIVLPVG NAGNISAVYK
GLLELEALDF INSLPKMTGI QATGASPVVR AIKENLPVVQ TEENPETLAS AIRIGAPVNA
EKALVAIRKT GGTAESVTDD EILAMQRDLA RKEGIGVEPA SAASVAGIRK LVEMGAIDRD
EKIVCVVTGH LLKDPETVIK QCEPPIEIDA DLPSLLSALH L