Gene Mboo_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0675 
Symbol 
ID5411387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp642440 
End bp642985 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID640867895 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_001403836 
Protein GI154150218 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.970108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAGAAC TTCGTATCCA CGGCAGGGGT GGCCAGGGAT CGGTCACCGC TGCGGAACTT 
ATTGCTGTTG CTGCGTTTGA AGGGGGCGTT TTTTCGCAGG CGTTCCCGGC CTTTGGTGTC
GAACGGCGCG GTGCCCCGGT GCAGGCATTC GTACGGTTTG ACGACCGTAA GATCCGGCTC
CGGAGCCAGG TGTACGAACC GGACTATATC ATTGTCCAGG ACAGCACGCT CATCAAAGAC
GTGAATGTTT TTTCGGGAGT AAAAAAGGGT GGCATCGTGA TTGTCAATAC CGAAAAGGCA
CCGGATTACC AAGTGCCCGA AGGCGTTAAG CTGATCACCA TCGATGCGAC ATCCATTGCG
CTCAAGGTGA TCGGGCTTCC CATCACCAAT ACTTCCCTCA TGGGAGCATT TGCCGCAGCA
ACCGGCGAGA TCAAGTTCGA TGCACTCAGG AATGCACTCT ACCACCGGTT CCCAAAAGAG
CTCGCGGAGA AGAATATCGA GGCAGCGCGG CAGGCGTTCG AGCACGTGAA GGGGGCGGCG
GCATAA
 
Protein sequence
MRELRIHGRG GQGSVTAAEL IAVAAFEGGV FSQAFPAFGV ERRGAPVQAF VRFDDRKIRL 
RSQVYEPDYI IVQDSTLIKD VNVFSGVKKG GIVIVNTEKA PDYQVPEGVK LITIDATSIA
LKVIGLPITN TSLMGAFAAA TGEIKFDALR NALYHRFPKE LAEKNIEAAR QAFEHVKGAA
A