| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0658 |
|---|
| Symbol | pheT |
|---|
| ID | 5411310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 626030 |
|---|
| End bp | 627658 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640867877 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001403819 |
|---|
| Protein GI | 154150201 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.542086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCA TCAGCCTTTC CTACAAGTAC CTCGAACGGC TCACCGGCAC CGACCGGGAG
ACAATCCTCA AACGCCTCCC GATGATCGGT TCCGAGGTCG AACGCCTGGA GGAGGACCAC
GCGGACGTGG AGTTCTTCCC CAACCGCCCC GATCTCTTCT CAGTCGAAGG TGCAGCCCGG
GCCATGCGGG GATTTTTAGG GATCGAAACC GGCCTGCCAC GCTACATGGT GAAACCCTCC
GGGATCCGCT TCACGATAGA TTCGAAGCTT GCCGCGATCC GGCCCTGCCT TGCTTCGGCG
GTCATCCGGA ATGTTTCCTT CGACGACGAG TCTATCCTCT CGGTCATGGC GCTCCAGGAA
GCCCTGCACT GGGCAGTCGG GAGAGGGAGG AGCAAGGTTG CCATCGGCAT CCACGACCTC
GACACCATCA CTCCACCGTT CCATTATGTT GCCTCCCCCC GGGTGAGGAA GTTTGTCCCG
CTCGATTTCA CTGACGAGCT CACCCTTGAC GGCATTCTCG AAAAACACCC GAAGGGCAGG
GACTATGCAA AGATCGTAAA AGACTTCCCG CTATTTCCCC TGATCGTTGA CAATGAGGAT
CATGTCTGCT CGTTCCCGCC GATCATCAAT GGCGAGCGGA CCCGGGTGAC GACCGCGACA
AAAAATATCC TTCTTGATGT GACCGGCACC GACCAGCGGG CGGTCAATGT GGCGGCAAAC
ATCATCTGTA CTGCTCTTGC CGAGGCTGGG GCGACCATCG AGAGCGTGGA GATAAATGGC
GCTCCTTTCC CCGATCTGGC TCCCGCGGTG CGCACGGTCA GCGTCCGGGA ATGCTCCGCG
CTCATCGGGG TCGATCTGAC CGCCCCGCAG ATGGCGGAAC TGCTCGAAAA GATGCGGTTT
GGCGCGGAGC CGGCCGGGCC GGATCAGGTC CGGGTGCAGG TACCCTGCTA CCGGGCCGAT
ATTATGCATG ACTGGGATCT CTTCGAGGAT GTTGCGATAG CCTACGGGTA CGAAAACTTT
GCCGTCGAAG TACCGCCCAC GTTCTCCATC GGGAAAGAGC ACCCGGCCAA CCGGATCGCC
GGCCAGGCGC GGGCTATCCT TGCCGGCCTC GGGTACCTGG AGATGATGCC TTTTACGCTG
ACAAACGAGC GTGTACTCTG CGACCGGATG CAGCGGCCCG GCGAACCGGC GACGCTCCGT
CTCATGCACC CGATCAGCGA GGAATACACT GTGGTCAGGA CCGATATTGT GCCGCTTCTC
CTGGAGATGC TGCAGGTCAA CCGGCACCGG GAACTCCCGC AGCGGCTCTT TGCCACCGGT
GATGTGATCG CCGATCTCCT CACCACCCAG CGCCTTGCGT TTGTCAGCAC CCACGCGGGT
GCGGACTTTT CTGAAGCCTA CGCCCATGCA GACGCGGTGC TCCGCGAGTT AGGGGTTGCC
TACAGCGCAG AAGTGTCGGA CGACGCTGCA TTTATCGAAG GAAGGCGGGC GGATATCATT
GTCGGCGGGA AAAAAGCAGG AGTGTTTGGC GAGATCCATC CCGCCGTGCT CACGGCGTTC
GAACTGGAAC AGCCGGTGGC CGCATTCGAG CTCGATCTCA GAGCCGTACC GGGATACCCT
TCCCCTTAA
|
|---|
| Protein sequence | MAIISLSYKY LERLTGTDRE TILKRLPMIG SEVERLEEDH ADVEFFPNRP DLFSVEGAAR
AMRGFLGIET GLPRYMVKPS GIRFTIDSKL AAIRPCLASA VIRNVSFDDE SILSVMALQE
ALHWAVGRGR SKVAIGIHDL DTITPPFHYV ASPRVRKFVP LDFTDELTLD GILEKHPKGR
DYAKIVKDFP LFPLIVDNED HVCSFPPIIN GERTRVTTAT KNILLDVTGT DQRAVNVAAN
IICTALAEAG ATIESVEING APFPDLAPAV RTVSVRECSA LIGVDLTAPQ MAELLEKMRF
GAEPAGPDQV RVQVPCYRAD IMHDWDLFED VAIAYGYENF AVEVPPTFSI GKEHPANRIA
GQARAILAGL GYLEMMPFTL TNERVLCDRM QRPGEPATLR LMHPISEEYT VVRTDIVPLL
LEMLQVNRHR ELPQRLFATG DVIADLLTTQ RLAFVSTHAG ADFSEAYAHA DAVLRELGVA
YSAEVSDDAA FIEGRRADII VGGKKAGVFG EIHPAVLTAF ELEQPVAAFE LDLRAVPGYP
SP
|
|---|
| |