| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0654 |
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| Symbol | |
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| ID | 5410046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 621075 |
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| End bp | 621920 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640867873 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001403815 |
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| Protein GI | 154150197 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGG TAAAAGTTGG CGTGCATGTC TCCATTGCCG GCTCGCTCGA TCTCGCGGTT
GACCGGGCAA AAGATGCAGG CTGCGACGTT TTCCAGATGT TCTCCCGTAA TCCCCGGGGA
TGGGGATACA AACCCCTGTC CGAGGGAGAT TGTGATCTCT ACAAAAAGAA GATCGCAGCC
ACCGGCCTCC TCCCGGTTGA CCATATGCCC TATCTTCCGA ATCTGGCCTC GCCAAAAACG
GAGATCTGGG AAAAGTCCGT CCAGACTCTG AATGCCGAGC TTGACCGGTG CAACAGGCTG
GGCATTCCCT ACCTGGTCAC CCATCTCGGC CACCATCTTG GGGACGGGAT TGCGGGTGGC
AGGGCCCGGG TCATAAAAGC CATAAATACC GTCCTTGCCT CATCGGAATC GGGAACAATG
CTGCTTTTAG AGAATACCGC CGGGGAGAAG AACAGCGTTG GCAGCAGTTT CGAGCACATC
GGTGCGATAC TTGCGGGGCT TTCCGATGAG AAAAGGATCG GAGTCTGTTT CGATACCTGC
CACGCGTTTG CCGCGGGTTA CGAGCTGCGG ACCAGGGAGG GAATTACCTC CACCCTTGCA
CAGTTCGATG AGCAGGTCGG GATTTCCCGT CTTCGCGTTA TCCATCTCAA CGACACCAAA
GGTGATCTCG GGAGCGGCCT AGACCGGCAC GAGCACATCG GGATGGGGTT TATTAGTGAA
GACGGATTCC GGCACATCCT GCACAACCCG GTCTTTGCGC GCCTCCCGCT TGTCTGCGAA
ACACCGGTGG ACGAACGAAG GGATGATCGC GGCAATATCG CAAAGGTCCG TGAACTGGCC
GCCTAA
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| Protein sequence | MAPVKVGVHV SIAGSLDLAV DRAKDAGCDV FQMFSRNPRG WGYKPLSEGD CDLYKKKIAA
TGLLPVDHMP YLPNLASPKT EIWEKSVQTL NAELDRCNRL GIPYLVTHLG HHLGDGIAGG
RARVIKAINT VLASSESGTM LLLENTAGEK NSVGSSFEHI GAILAGLSDE KRIGVCFDTC
HAFAAGYELR TREGITSTLA QFDEQVGISR LRVIHLNDTK GDLGSGLDRH EHIGMGFISE
DGFRHILHNP VFARLPLVCE TPVDERRDDR GNIAKVRELA A
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