Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0651 |
Symbol | |
ID | 5410043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 617621 |
End bp | 619066 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640867870 |
Product | amino acid permease-associated region |
Protein accession | YP_001403812 |
Protein GI | 154150194 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTAC GGGCGCTTAT CCCGAAGGGT ACCCAGGCCT TCAGGACCAA GACCATTGAC AAACTCATGG AGTGTACCAG CGGCGAGCAT GCGCTCAGGA AAGTGCTTTC GCCCCTCGAT CTCACGCTCA TGGGCATTGG CGCCATTATC GGTACCGGTA TCTTTGTCAT CACCGGGGTA GTCGCAGCCA ATTATTCCGG CCCGGCCCTG GTCATTTCCT TTGTCATCGC CGGTATTGTC TGTGCTTTTG CAGCCCTTGC GTACGCGGAG TTTGCCGCAA TGGTCCCGGT TGCCGGAAGC GCATACACGT ACAGCTACGC GTCGCTTGGT GAGATCTGGG CCTGGATCAT CGGGTGGGAC CTGATCCTCG AATACGCGGT CTCGATAGCG GCAGTTGCAG TCGGCTGGTC GGGATATGTC ACCAGCCTTG CAGCAGGGGC CGGGATCACG TTACCTGCAA TGCTTGTGAA TCCCCCCGGG ACCAGTGGGG GACTTGTCAA TATCCCGGCA ATGGTAATCA TCGGCCTTGT AACGCTCCTG CTCATCATCG GGGTACGTGA GAGTGCCCGG GTGACCACAG TAATCGTCGC CATAAAACTG GGGGTAATCC TCCTTTTCCT GTACCTGGCC TTTGGTCACA TCCAGCCGGC CAACTGGGTG CCATTCATGC CGTTTGGCTG GAACGGGGTT ATCACCGGGG CCGCAATCGT CTTTTTTGCC TACATCGGGT TCGATGCAGT CTCAACCGCG GCAGAAGAGG TTCAAAACCC AACAAGGGAT GTGCCCCTCG GGATTCTCTC TTCACTTGCC ATTGCGACAG TACTCTATAT TGCGGTCTCC GCTGTGCTCA CCGGGATAGT TCCGTACTCG CTCTTTGCCG GGACAAGCGC GCCGGTTGCA TTTGCCCTTG AACAGATCGG GATCTCATGG GGATCGGCGC TCATCTCAGT CGGGGCAATC TGCGGCATCA CTTCGGTTAT CATTGTCCTC CTGTACGGCC AGACCCGGAT CTTCTTTGCC ATGTCCCGTG ACGGGTTGCT TCCCGGGATA TTCCGGCAGA TCCACCCGGT ATACCGGACA CCGGTCAAGG TTACCCTTCT TGTCGGCACG GTCACGGCAC TCCTTGCCGG ATTCCTTCCG CTCACCACAA TAGCCGAGCT AGTGAACATC GGGACGCTTG CCGCATTCAT CATCGTGTCT CTGGGTGTGA TCGTGCTCCG GTACACGAAA CCGTCGTTTC CACGGCCTTT CCGGTGCCCG CTTGTCCCCC TCGTCCCAAT TCTCTGCATT CTTTCCTGCG GACTCCTGAT CCTCGCACTC CCGCTCGTCA CTCACCTGCG CTTTGTGCTC TGGCTCACCG TCGGCCTCGT AATCTATGTC ATCTACAGCC GGCACCATAG CAGGATCAAC GACAACACGA GTGCGCTTGA ATGCTGGAAA GGATAA
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Protein sequence | MDLRALIPKG TQAFRTKTID KLMECTSGEH ALRKVLSPLD LTLMGIGAII GTGIFVITGV VAANYSGPAL VISFVIAGIV CAFAALAYAE FAAMVPVAGS AYTYSYASLG EIWAWIIGWD LILEYAVSIA AVAVGWSGYV TSLAAGAGIT LPAMLVNPPG TSGGLVNIPA MVIIGLVTLL LIIGVRESAR VTTVIVAIKL GVILLFLYLA FGHIQPANWV PFMPFGWNGV ITGAAIVFFA YIGFDAVSTA AEEVQNPTRD VPLGILSSLA IATVLYIAVS AVLTGIVPYS LFAGTSAPVA FALEQIGISW GSALISVGAI CGITSVIIVL LYGQTRIFFA MSRDGLLPGI FRQIHPVYRT PVKVTLLVGT VTALLAGFLP LTTIAELVNI GTLAAFIIVS LGVIVLRYTK PSFPRPFRCP LVPLVPILCI LSCGLLILAL PLVTHLRFVL WLTVGLVIYV IYSRHHSRIN DNTSALECWK G
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