Gene Mboo_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0618 
Symbol 
ID5411132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp584334 
End bp585401 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID640867837 
Producthypothetical protein 
Protein accessionYP_001403779 
Protein GI154150161 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.409436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAC TCCGGTTTTA CCGCATCTAT GATATCGGTC GGGAGATCGA TATCGACTGG 
CTGGAAAAGT CCCTTGCCCG GAATTATTTT ACTGCCCGTA CCAGTTTTGT CCGGGTCAAG
CCCAAGTCCA TTATGATCGA GTCGTCCCCG CTCCTGATCC GCATGCTGCC GGTCACGGTG
GAACGGGAAG GGCGCTCGTA CGAGTTCTCC GCAGTTGCCC GTGTCTATGA TATCGGCGTC
ATCAGCCTCT GTTTCATCTA CGATGACGAG CAGGCAGATC ACCGGGAACT CGAGGAGATC
GCGTTCCGGT TTGCCGGCCA GGAAGGGCTC TCGGATTTCT TCCTCCAGTA CCTCAATACA
CTCGGGGAGA TCATCAAGCC GCATATCAAG AATTTCGCGA TTGATCCGGA CTTTTACGAG
GATTACACGA TCTACGTGAC CGACCGGCGG GACGACACCA TCGACCCGGT GCCGCTCCTG
CTGGGGGACC GGACCTGTGT CTCGCCCCAG ATCCGGGAGG ATATCATAAA GAATTCCCTC
AGTTATTCAA ACGAGGATCT TGCCGTGATC TCGTGGGATT CTGCCCTGCT GTGCGGCCCC
GAGAGCCCGA CCGATATTAT CGATCTCATC GAGTTTGCAA ACGTGCAGGT GCTCGAACTC
CGGTACTATG ACCGGGAGCT GACCCGTGAG ATGGCGCGGA TGTACGACGA TATCGAGCAT
GCGGACCGGT TGTCCTGGTT TAACCGGGGC GGCCAGTACC ATGCCATCAT GAAACACCAG
ATGAAAACGT CCGCGGAGAT CTCGGAGACG ATCGAGAAGG TTGACAACCT GATCAAGGTG
ACCGAGGATG TCTATTATGC CCGTGTCTAT GCAGCAGCCC TGAAGATCCT GCGAAGTGGC
CAGTGGAGCG AGAGCGTGAG CCGGAAGATC GACGTGATCC GGGAGAACTA CTCGATGCTC
TCCGATGAGG TCAGGATCCA GCACTCCCAT TTCCTTGAGT GGGTGGTGAT CCTGCTTATT
GCCTTTGAGA TCGTGGTGAT GCTCTGGGAG CGGGTATTCG CGGGATAA
 
Protein sequence
MISLRFYRIY DIGREIDIDW LEKSLARNYF TARTSFVRVK PKSIMIESSP LLIRMLPVTV 
EREGRSYEFS AVARVYDIGV ISLCFIYDDE QADHRELEEI AFRFAGQEGL SDFFLQYLNT
LGEIIKPHIK NFAIDPDFYE DYTIYVTDRR DDTIDPVPLL LGDRTCVSPQ IREDIIKNSL
SYSNEDLAVI SWDSALLCGP ESPTDIIDLI EFANVQVLEL RYYDRELTRE MARMYDDIEH
ADRLSWFNRG GQYHAIMKHQ MKTSAEISET IEKVDNLIKV TEDVYYARVY AAALKILRSG
QWSESVSRKI DVIRENYSML SDEVRIQHSH FLEWVVILLI AFEIVVMLWE RVFAG