| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0610 |
|---|
| Symbol | |
|---|
| ID | 5411124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 577141 |
|---|
| End bp | 577629 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640867829 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001403771 |
|---|
| Protein GI | 154150153 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.89367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGC AGCAACTGAT CAGGACCGGC GATCCGGCGC GGAATTTCGA ACTTAAAGAC
CAGAACGATA GCACGTTCGA TCTCTTCGAA CAGTCCGGGA AAAAAGTCCT CCTCTCCTTC
CATCCCCTTG CATGGACGCC CTACTGCTCC GCCCAGATGA AATCGCTTGA GGAGAACCGG
GATATCCTTG CCTCGCTTGG CACCATGGCA GTCGGGCTCA GCGTTGATAC CGTTCCCTGC
AAGAAGGCCT GGGCCGAGAA CCTGGGGATC ACCCACACGC CCCTGCTCTG CGATTTCTGG
CCCCACGGCC ATGTTGCCAT GACCTACGGG ATCTTCCGGG ATGCAAACGG GTTCTCTGAG
CGGGCCAATA TTATCATCGA TGAGAACCGG AAGGTTACCT TTGTAAAGAT CTATCCGCTT
CACAGCGTTC CCGATATCCA GGAGATCATC ACGTTCCTTC AGCATCCAAC GAACTTACGG
GCGTCTTGA
|
|---|
| Protein sequence | MEQQQLIRTG DPARNFELKD QNDSTFDLFE QSGKKVLLSF HPLAWTPYCS AQMKSLEENR
DILASLGTMA VGLSVDTVPC KKAWAENLGI THTPLLCDFW PHGHVAMTYG IFRDANGFSE
RANIIIDENR KVTFVKIYPL HSVPDIQEII TFLQHPTNLR AS
|
|---|
| |