| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0599 |
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| Symbol | |
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| ID | 5412159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 568558 |
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| End bp | 569769 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867818 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_001403760 |
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| Protein GI | 154150142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.588182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.202427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCT TGTCTGAACG GATTCTTGGT GCTGCCGCAG GTGAATATGT TGACCGGAAG
GTTGACCGGG CCTATGCCCA CGACGGAACC GGTGTCCTTG CCCTGGAAGC CTGGAAAGAG
ATGGGAAGAG ACCGGATGGG AAAGGAGACC GGATATTATA TCCAGTTCGA TCATATCGCC
CCGGCCAATA ATGGCCTTAC TGCAACCCTC CAGCATGAAC TGCGAAATTT TGCAAAGCGC
TCATCCATGC ATTTCTCTGA TGTCGGGTGC GGTATCTGCC ACCAGCTGAT GGCTGAAGGG
GAGGTCCTGC CCGGCGAGAT CGCGGTCGGG GCGGACTCGC ACACCGTTAT GCTGGGGGCA
TTCGGGGCGT TTGCGACCGG TGTGGGGGCA ACCGACATGG CGGCAATCTG GCTGACCGGG
GAGACCTGGT TTCGGGTCCC CGAATCTGTG GGTATCCACC TGACCGGGAA TCTGACCGGT
GCCGCTGAAG CAAAAGACCT TGCGCTTGCC TACGTGGGAA AACTCGGTAC TGACGGCGCA
ACCTACCAGG CGCTGGAATT TATCGGTGAA GGGGTACGTC ATCTCTCCAT GGATGAACGG
TTTGTCCTCT CGAATCTCTC GGTTGAGGCC GGGGCAAAGG CCGGGCTTTT TTATGCTGAT
GAGGTGACCC TCCGTTACCT CAAGGAGCAC GGACTGGATA CGGTAAGTCA GGAATATGAG
TCATGTTCGT ACTGCCGGGA GCTTGATTTT GATCTCACCG ACATCGTACC GCTGGTATCC
GTCCCGCACC GGGTGGACAC CGTCAAACCC GCGGACGCCG TTGCCGGCGT GCCTCTTGAC
CAGGTCTTTG TCGGGACCTG CACGAACGGG CGGTACTCCG ATCTTGCCCG GTTTGCCCGG
CTTGTGAAGG GAAAGAAAGT GGCGGTCCGG ACCCTTGTTG TCCCGGCATC GGCAGCAATC
CTGGAAAAGG CAATCCGTAC CGGGGTGCTT GCAGATATCG TTGCGGCAGG GTGCACCATT
GGAACACCGG GATGCGGCCC CTGTCTTGGC TACCACATGG GCGTGCTTGG CGAAGGAGAG
ATCTGTCTCT CGACTGCCAA CCGGAATTTC AAGAACCGCA TGGGCGTAGG CGCTGAGATT
TACCTGGGCT CTGTTGCTAC TGCAGCGGCG AGCGCCCTTG TCGGGGAGAT CGCGTCACCT
GAGGTGGGAT AA
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| Protein sequence | MSTLSERILG AAAGEYVDRK VDRAYAHDGT GVLALEAWKE MGRDRMGKET GYYIQFDHIA
PANNGLTATL QHELRNFAKR SSMHFSDVGC GICHQLMAEG EVLPGEIAVG ADSHTVMLGA
FGAFATGVGA TDMAAIWLTG ETWFRVPESV GIHLTGNLTG AAEAKDLALA YVGKLGTDGA
TYQALEFIGE GVRHLSMDER FVLSNLSVEA GAKAGLFYAD EVTLRYLKEH GLDTVSQEYE
SCSYCRELDF DLTDIVPLVS VPHRVDTVKP ADAVAGVPLD QVFVGTCTNG RYSDLARFAR
LVKGKKVAVR TLVVPASAAI LEKAIRTGVL ADIVAAGCTI GTPGCGPCLG YHMGVLGEGE
ICLSTANRNF KNRMGVGAEI YLGSVATAAA SALVGEIASP EVG
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