Gene Mboo_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0589 
Symbol 
ID5411697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp559162 
End bp560085 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content56% 
IMG OID640867808 
ProductCoB--CoM heterodisulfide reductase 
Protein accessionYP_001403750 
Protein GI154150132 
COG category[C] Energy production and conversion 
COG ID[COG2048] Heterodisulfide reductase, subunit B 
TIGRFAM ID[TIGR03288] CoB--CoM heterodisulfide reductase, subunit B 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0867729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0373464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT CTAAAGCAAA CCACACGTTC GCATTATACC TTGGCTGCAT TGCACCCAAC 
CGGTACCCGG GCGTGGAATC TGCAGCCATC AAGGGTTGCA AGAAACTGGG CATCGACCTT
GTCCCCCTCA AGGGTGCAAG CTGCTGCCCT GCCCCCGGTG CCTTCGGTTC CATTGACCTG
AATGTCTTCT ATGCGATGGC AGCACGCAAC CTCGTGCTCG CCGAGCAGAT GAAGACCGAT
ATCGCACTGG TCTGCAACGG CTGCTACAAA TCAATCTGGG AAGTCAACCA CAAGCTCAAG
CACAATCAGG ATCTCCGCGA CGGCGTCAAC GAAGTGCTCA AGGAAGTAGA CATGGAGTTC
AAGGGCACCA TCAACGTCTA TCATCTCGCC GAACTTCTCT ACAACGACAA GTATGCCGGT
GTCGCAAAGA TCAAGGATAC GGTTGTCAAC CCCCTGACCG GTGCCCGTAT CGCCGTCCAC
TACGGCTGCC ACCTCACCAA GCCTCACAAG GACCGTGAGT TCGAGAAAGA GGTCATGTTA
AACACCGAGC ACCCGGTCTG GATGGAAGAA CTGGTTGCAG CCCTTGGCGC AACCCCGGTC
GAGTACCGCA ACAAGATGCA GTGCTGCGGT GCCGGCGGCG GTGTCCGCGG ATACGACATT
GTCCACTCGC TGGATATCAC CAACGAAAAG CTGATCAACC TCAAAGAGGT AAAGGTGGAC
GCTCTTACGG ATATCTGTCC GTTCTGCCAG CTCCAGTTCG ACCGCGGCCA GATCGAGATC
CAGGAGAAGT TCGGTGTCAG TTACGGCCTG CCCGTGCTGC ACTTCGCCGA ACTGCTCGGC
CTTGCACAGG GAATGAGCCC GCAGGAACTC GGGCTTGACC TGCACGCGAT CAGCTGTGAA
CCATTCCTGC AGAAGGTGCT CTAG
 
Protein sequence
MSESKANHTF ALYLGCIAPN RYPGVESAAI KGCKKLGIDL VPLKGASCCP APGAFGSIDL 
NVFYAMAARN LVLAEQMKTD IALVCNGCYK SIWEVNHKLK HNQDLRDGVN EVLKEVDMEF
KGTINVYHLA ELLYNDKYAG VAKIKDTVVN PLTGARIAVH YGCHLTKPHK DREFEKEVML
NTEHPVWMEE LVAALGATPV EYRNKMQCCG AGGGVRGYDI VHSLDITNEK LINLKEVKVD
ALTDICPFCQ LQFDRGQIEI QEKFGVSYGL PVLHFAELLG LAQGMSPQEL GLDLHAISCE
PFLQKVL