Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0588 |
Symbol | |
ID | 5411696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 556994 |
End bp | 559078 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867807 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001403749 |
Protein GI | 154150131 |
COG category | [C] Energy production and conversion |
COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0895503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0578993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACAGG AAGTCAAGAA GCAGGCTCCC GCACCGGCAG CAGCTGCCAG TGCACCAGCG GCAGCAGGCT CAACCACAAA GCAGGAGGCC CGGATCGGTG TTTTCATCTG CCACTGCGGT ACCAACATTG CCGGGTCAAT GGATATTCCG GCAGTCGAGG AATATGCCAA GACCATCCCC AATGTGGCCT ATGTTGACAA TTATAAGTAC ATGTGCTCAA TGCCCGGGCA GACCGTCATC AGTAAGGCAG TCCATGAACA CAAGCTGACC GGCGTCGTTG TCGCTGCATG CACCCCGCGT CTCCACGAGC CGACCTTCCG GACGGCAACC AAGGATGCAG GCTTAAACCC CTTCCGGTTC GAGATGGCCA ACATCCGTGA CCAGAACTCA TGGGTGCACA TGCACGACCG TGAGGGTTCC ACCGAAAAGG CAAAGGACGC AGTCCGTATT GCTGTTGCAA AGGCTGCACT CCTCCAGGAT CTCTACCCGA AGTCCGTGCC GGTCGAGAAG ACCGCGATGG TCGTCGGCGC CGGTGTCGGC GGTATGCAGG CAGCCCTTGA CCTTGCGGCA GCAGGGATCA AGACCTACCT CATCGAATCC GATATGAGTA TCGGCGGGCG CATGTCCCAG CTCGATAAGA CCTTCCCGAC ACTCGACTGC TCGCAGTGTA TCTTAACCCC GAAAATGGTG GATGTCGGCA GGAGCGACAA GATCGAGCTC ATGACCTGGT CTGAAGTCCA CGAAGTCGAA GGGTACATCG GCAACTTCGA TGTCACCATC AGAAAGAAGG CCCGTGGCGT GATGACCCCC AAGGAAGCGG AAGCCAGGGG TATTGTGGGC GGCGGCTGCA ACGGCTGCGG TGACTGTGAT ACAGTCTGCC CGGTAGTCAA GCCCAACGAG TTTGAAATCG GCATGAAGCC GAGAAAAGCG ATCTACATCA ACCACCCGCA GGTCGTCCCT CTGATCTACA CGATCGACTT CAATACGTGT GTCAAATGCG GCCTCTGCGT GACCGCGTGC GGTCCCGAGA AGCGTGCCAT TGACCTCGAG ATGAAAGACG AGTTTATCAA GGTCAAGGTC GGAACGGTCA TCCTCGCTAC CGGGTACGAT ATCTTCCCCA TCGAGAAGAA AGAAGAATGG GGATACAAGC GGTACGAGAA CGTTATCACC AGCCTTGAGT TCGAGCGCCT TATCTGCGCA TCCGGCCCGA CCGGCGGCCA CCTTGTCCGC CCGAGCGATG GCGAGACCCC TAAACGGATC GCCTTTGTAC TCTGTGCAGG GTCGCGTGAC AACACGGGTA TCGGCAAGCC GTACTGTTCC CGGTTCTGCT GCATGTACTC ACTGAAGCAC GCCCACCAGA TCACTGAAAA GATCCCCGGC GCGATTCCCT ACATCTTCTA CATGGATATC CGGTCATTCG GTAAGATGTA CGAAGAGTTC TACTACCGCA TCCAGGACGA AGGCGCGAAG TTCATCCGCG GCCGTGTGGC AAACATCCTT GAGGATCCCA AAACCAAGAA CCTGCACGTC TACGCGGACG ACACCCTGCT CGACCGCCCG GTCGACATGG AAGTCGATCT CGTCGTGCTC GCAGCAGCAA TCCAGCCCAA AGAAGACACC AACCGGACCA GGAAACTCTT CGGTGTCTCC TGTTCCATGG ACGGATGGCT GCTTGAAGCC CACCCGAAAC TCAACCCCTG CGGAACCACC ACCGCCGGTG TCTTCCTCGC CGGTGTCTGC CAGGGCCCCA AGGATATCCC TGACACGGTA GCACAGGCAG AAGGTGCGGC GTCGGCTGCA AGTATCCCGA TCCACATGGG AGAAGTCGAA CTCGAGCCGT ACTTTGCCAT GTGTATCGAA GAGAAGTGCG CAGGCTGCGG CATGTGCGTG AATCTCTGCC CGTACAGTGC CCTTTCTCTT GTCGAGAAGG ACGGGAGAAC CGTCATGCAG GTCACCGAGG CCAAATGCAA GGGTTGCGGT ACCTGTGGAG GGTTCTGCCC CGGTGGGGCC ATCTGGATGC AGCACTTTAC CACCCCGCAG ATCGTTGCAC AGATCGATGC ATTCCTGCTC GGAGGTGAGC AGTAA
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Protein sequence | MKQEVKKQAP APAAAASAPA AAGSTTKQEA RIGVFICHCG TNIAGSMDIP AVEEYAKTIP NVAYVDNYKY MCSMPGQTVI SKAVHEHKLT GVVVAACTPR LHEPTFRTAT KDAGLNPFRF EMANIRDQNS WVHMHDREGS TEKAKDAVRI AVAKAALLQD LYPKSVPVEK TAMVVGAGVG GMQAALDLAA AGIKTYLIES DMSIGGRMSQ LDKTFPTLDC SQCILTPKMV DVGRSDKIEL MTWSEVHEVE GYIGNFDVTI RKKARGVMTP KEAEARGIVG GGCNGCGDCD TVCPVVKPNE FEIGMKPRKA IYINHPQVVP LIYTIDFNTC VKCGLCVTAC GPEKRAIDLE MKDEFIKVKV GTVILATGYD IFPIEKKEEW GYKRYENVIT SLEFERLICA SGPTGGHLVR PSDGETPKRI AFVLCAGSRD NTGIGKPYCS RFCCMYSLKH AHQITEKIPG AIPYIFYMDI RSFGKMYEEF YYRIQDEGAK FIRGRVANIL EDPKTKNLHV YADDTLLDRP VDMEVDLVVL AAAIQPKEDT NRTRKLFGVS CSMDGWLLEA HPKLNPCGTT TAGVFLAGVC QGPKDIPDTV AQAEGAASAA SIPIHMGEVE LEPYFAMCIE EKCAGCGMCV NLCPYSALSL VEKDGRTVMQ VTEAKCKGCG TCGGFCPGGA IWMQHFTTPQ IVAQIDAFLL GGEQ
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