Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0572 |
Symbol | |
ID | 5410776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 542205 |
End bp | 543038 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640867791 |
Product | tetrahydromethanopterin S-methyltransferase subunit D |
Protein accession | YP_001403733 |
Protein GI | 154150115 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4060] Tetrahydromethanopterin S-methyltransferase, subunit D |
TIGRFAM ID | [TIGR01112] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0410349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.325952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAG TAGCAGCAAA GCCGGCAGCA GGCTCGGCAA TAAACCCCAC CGCCATGGTG ATCGGTATCG TCATGCTCAT CATCCTGCTC GGGATCGCCT ACGTGGTCTC ACCGGGTCTC GGCCTCATGG CCCTGATCGG CGTGGTCATC GGCGGCGTCC TGATCGGATT CGGCGTCCAC TTCGTGCCGG TCGGCGGCGC ACCCGCAGCA ATGGGCCAGG CACCCGGTAT CGCAACCGGT GTCGCCATGC TCGCAGCAGG TGCAGGGCTT GCCGGACTCT TCGGAGGCGC CTGGGCAGCT GACCAGGGAT TTGTCATCGC CATTATCACG GGCGGTGTCG GCGGCGGCAT GATGATGGCC ATCACCTGTA TGATGGTCAA CTTCGTGTAC ATCTTCGGCA TGGGCATTCC CGCAGCTTCA GGCAAGGTAT TAAAGGACCC GATCACCGGG GACTCCCAGC CTGAATACAA GTCGCAGGGT ACCGAAGGCC ATGGCCTGCC GTTCGTCTCC TTTGTCGGCG GCGTTCTCGG CGGCGTTCTC GGCGGTGCAG GCGGCACGCT CATCTATCTC GAGCTTCTCA GCCTGTACAA GGCAACGCTC CCGAACATCA TGAGCATCTC CGCTGCACAG GCACTCCCGA TCGCAGTTGC CACAGCAGGT ATCTTTGCCA TCGGCATGTT CCTTGTAAAC TCGGTGCTGA CCGCATACAA CATCACCGGA ACCATCGAGG GCCCGCACGA CCCCAAGTTC AAGCGCTGGC CACGGTCGGT TGTTGCATCC GCGGTTGCAT CGGCACTCTG CGGTCTTGTG GCGATCCTCA TCGTCACGTT TTGA
|
Protein sequence | MTAVAAKPAA GSAINPTAMV IGIVMLIILL GIAYVVSPGL GLMALIGVVI GGVLIGFGVH FVPVGGAPAA MGQAPGIATG VAMLAAGAGL AGLFGGAWAA DQGFVIAIIT GGVGGGMMMA ITCMMVNFVY IFGMGIPAAS GKVLKDPITG DSQPEYKSQG TEGHGLPFVS FVGGVLGGVL GGAGGTLIYL ELLSLYKATL PNIMSISAAQ ALPIAVATAG IFAIGMFLVN SVLTAYNITG TIEGPHDPKF KRWPRSVVAS AVASALCGLV AILIVTF
|
| |