Gene Mboo_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0567 
Symbol 
ID5410771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp539364 
End bp540104 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID640867786 
Producttetrahydromethanopterin S-methyltransferase subunit A 
Protein accessionYP_001403728 
Protein GI154150110 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A 
TIGRFAM ID[TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A
[TIGR01149] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.369286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.231372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA AGAAATCACC CGCAACTGGA TGGCCGCTTG TCAAAGGCGA CTTCCACTCC 
GGAGATGCAA ACAGCCCAGT CGCTGTTATC ACCATGGGAT CCCACCTCGA TGAACAGGGT
ATCTGCGATG CCGGCGCTGC GATGTGCGGT TCCTGTAAGA CCGAGAATCT CGGCCTGGAA
AAGGTCATCG CCAACTACAT CGCCAACCCC AACATCAGGT TCGTGCTCCT CTGTGGTACC
GAAGTCAAGG GCCACCTTTC GGCCCAGTCT CTTGTAGCCC TCCACAAGGG CGGTGTCAAA
GACGGAAGAA TCGTCGGTGC CGAAGGCGCT ATCCCCTTCA TTGAAAATCT CAATGACGCG
GCTATCAAGC GCTTCCAGGA GCAGGTTTCC ATTGTCAATA TCATGGAGAC CGAGGACCTG
AACGCCATCA AGGCCAAGAT CAATGAACTC AAGGCCAAAG ACCCCGGCGC GTTCGCCGCT
GACCCCCTCG TTGTAGAGGT CAAGGAAGCA GCAGCCGGCG GTGCTGAAGT CGCTGCAGCG
GGGGCAAACC CCCAGTTCCT CGAGATCGAG AAGAGACTCG ACAAGATCGA GAAGAGACTC
GAGTTCGTGG ATGCTGAAGT GGCACAGCGT GTTGGACGAA AGATCGGGAG AGATATCGGC
ATACTGTACG GCCTCGTCGC TGGACTTGTC GTATTTGTCA TGCTGCTGTT CATGCTCCAG
AAATTGATGG CATTGGTGTA A
 
Protein sequence
MADKKSPATG WPLVKGDFHS GDANSPVAVI TMGSHLDEQG ICDAGAAMCG SCKTENLGLE 
KVIANYIANP NIRFVLLCGT EVKGHLSAQS LVALHKGGVK DGRIVGAEGA IPFIENLNDA
AIKRFQEQVS IVNIMETEDL NAIKAKINEL KAKDPGAFAA DPLVVEVKEA AAGGAEVAAA
GANPQFLEIE KRLDKIEKRL EFVDAEVAQR VGRKIGRDIG ILYGLVAGLV VFVMLLFMLQ
KLMALV