Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0567 |
Symbol | |
ID | 5410771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 539364 |
End bp | 540104 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640867786 |
Product | tetrahydromethanopterin S-methyltransferase subunit A |
Protein accession | YP_001403728 |
Protein GI | 154150110 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A |
TIGRFAM ID | [TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A [TIGR01149] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.369286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.231372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA AGAAATCACC CGCAACTGGA TGGCCGCTTG TCAAAGGCGA CTTCCACTCC GGAGATGCAA ACAGCCCAGT CGCTGTTATC ACCATGGGAT CCCACCTCGA TGAACAGGGT ATCTGCGATG CCGGCGCTGC GATGTGCGGT TCCTGTAAGA CCGAGAATCT CGGCCTGGAA AAGGTCATCG CCAACTACAT CGCCAACCCC AACATCAGGT TCGTGCTCCT CTGTGGTACC GAAGTCAAGG GCCACCTTTC GGCCCAGTCT CTTGTAGCCC TCCACAAGGG CGGTGTCAAA GACGGAAGAA TCGTCGGTGC CGAAGGCGCT ATCCCCTTCA TTGAAAATCT CAATGACGCG GCTATCAAGC GCTTCCAGGA GCAGGTTTCC ATTGTCAATA TCATGGAGAC CGAGGACCTG AACGCCATCA AGGCCAAGAT CAATGAACTC AAGGCCAAAG ACCCCGGCGC GTTCGCCGCT GACCCCCTCG TTGTAGAGGT CAAGGAAGCA GCAGCCGGCG GTGCTGAAGT CGCTGCAGCG GGGGCAAACC CCCAGTTCCT CGAGATCGAG AAGAGACTCG ACAAGATCGA GAAGAGACTC GAGTTCGTGG ATGCTGAAGT GGCACAGCGT GTTGGACGAA AGATCGGGAG AGATATCGGC ATACTGTACG GCCTCGTCGC TGGACTTGTC GTATTTGTCA TGCTGCTGTT CATGCTCCAG AAATTGATGG CATTGGTGTA A
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Protein sequence | MADKKSPATG WPLVKGDFHS GDANSPVAVI TMGSHLDEQG ICDAGAAMCG SCKTENLGLE KVIANYIANP NIRFVLLCGT EVKGHLSAQS LVALHKGGVK DGRIVGAEGA IPFIENLNDA AIKRFQEQVS IVNIMETEDL NAIKAKINEL KAKDPGAFAA DPLVVEVKEA AAGGAEVAAA GANPQFLEIE KRLDKIEKRL EFVDAEVAQR VGRKIGRDIG ILYGLVAGLV VFVMLLFMLQ KLMALV
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