| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0564 |
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| Symbol | |
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| ID | 5410768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 536581 |
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| End bp | 537189 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640867783 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001403725 |
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| Protein GI | 154150107 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.151741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTG CGGCCCTGCT TGAGGAAGCG CATCGACTTG CCCGGATCGG GCGGTACAAC
GAAGCCCTTG CGGAATATGA TAAGGCTCTT GAATCCGACC CTTCGAATAC CACGGCCCTT
GAGCGGAAAG GCGGGGTCTT TTATGCTCTT GGGAGGCACG AAGATGCCCT CGCCTGCTAT
GACCGTGCAC TTGCGATAAA CCCCCACCTC CTGACAACGT GGTACGAGAA GGGGTATACC
CTGCGCAAGA TCGGCCGGTA CGTGGAAGCG ATCACCTGTT TTGAGCAGGC ACTTGCCCTT
GACCCGGAGT ACATGCTCGC CCTTGCAAAC AAAGGGTACG CATTAAACGA ACTCGGGCGG
TTCGACCAGG CGCTTGCCTG TTTTGAGCGC CTTCTTGAAA CGAGTCCAAG CAATATCCGG
GCGATGACGG CAAAGGGCAT TGCCCTGACA GGTCTCGGGC GTAACAAGGA GGCACTCGCC
ACGTTCGACC AGGCAATCGG TCTCAATGCG ATCAATTCCT TTGTCTGGCA GCACCGGGCC
GAGGCCCTGC GCAGGCTTGG GCGGACAGCG GAAGCCGAAG AGAGCCTCCG TCATATATCC
GGAACATAA
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| Protein sequence | MDTAALLEEA HRLARIGRYN EALAEYDKAL ESDPSNTTAL ERKGGVFYAL GRHEDALACY
DRALAINPHL LTTWYEKGYT LRKIGRYVEA ITCFEQALAL DPEYMLALAN KGYALNELGR
FDQALACFER LLETSPSNIR AMTAKGIALT GLGRNKEALA TFDQAIGLNA INSFVWQHRA
EALRRLGRTA EAEESLRHIS GT
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