Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0560 |
Symbol | |
ID | 5411182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 533412 |
End bp | 534350 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640867779 |
Product | hypothetical protein |
Protein accession | YP_001403721 |
Protein GI | 154150103 |
COG category | [S] Function unknown |
COG ID | [COG4866] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.15423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCCC AGGAGGATTT CCGCCCGGTA ACGCTTGCCG ACCGGGCATT CTTCGAACGT CATTATGCGC GCTATCCGCA GAGCCACAGC GACAACACGT TCACGAATAT GGTCTGCTGG AATCACATCG CCCAGTACCG GTATGCGTAT GTGAACGGGA GCGTGATCCT GGCAAGCACG CTCTTTGGGG TAACCCGTTT CCGGCCACCC ATCGGACCCC GTGACCCTGA CCTCATGAGG GATGTAATCC GGTTTGCAAT GGAGTTTGCC GACGATACTC CGATGGTACT TATCGATCCG GAAACTGCCC GGTGGATGAA AGAACTTGAT CCCTCCCTTA CCCTTGTCCC GGACCGGAAT CACTCCGAGT ATGTCTACCT CGCATCGGAC CTTGCCGAGC TGCCGGGAAA ACACTATCTC AAGATCCGTA ACCAGATCAA CAAATTCCGA AAGAACTGTT CACACACGAT CGAGCCAGTT ACGGGTGAAA ACCGGGAAGA GGTGATGCAG TTCCTGGTAA AGTGGTGCGA GTGGAAGGGG TGCGAAAACG ATCTCGTCCT TGCCCACGAG AAAGATGCGG TCTTTTATGC GATTGAGCAC TTCACCGAAC TCCCCCTGCG GGGCCTGATG ATCCGGGTTG ACTCCCAGGT CGCTGCCATC TCCCTGTTCG AGCGCCTCAA CGAGGATACG GCGCTTGTCC ACTTCGAAAA AGGGCTCCCG GACTGCGAAG GGATCTACAA GGCTGTAAAC CAGGCAACCG CTGCCCTTCT CGTCCATGAG GTAAAGTACA TCAACCGGGA AAGCGACCTC GGTGTAGCCG GCCTCCGTGA GGCAAAATTA CGGTACCATC CTCACCATAT GGTCGATGTC TGGTCCCTCA AGAGTAAAGA GGATGCATCC GCGTCAAACC GCACTTCTCT TCAGGTATCC GAATTGTAA
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Protein sequence | MLSQEDFRPV TLADRAFFER HYARYPQSHS DNTFTNMVCW NHIAQYRYAY VNGSVILAST LFGVTRFRPP IGPRDPDLMR DVIRFAMEFA DDTPMVLIDP ETARWMKELD PSLTLVPDRN HSEYVYLASD LAELPGKHYL KIRNQINKFR KNCSHTIEPV TGENREEVMQ FLVKWCEWKG CENDLVLAHE KDAVFYAIEH FTELPLRGLM IRVDSQVAAI SLFERLNEDT ALVHFEKGLP DCEGIYKAVN QATAALLVHE VKYINRESDL GVAGLREAKL RYHPHHMVDV WSLKSKEDAS ASNRTSLQVS EL
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