Gene Mboo_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0542 
Symbolrpl14p 
ID5412236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp523215 
End bp523613 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content58% 
IMG OID640867761 
Product50S ribosomal protein L14P 
Protein accessionYP_001403703 
Protein GI154150085 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR03673] 50S ribosomal protein L14P 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.699463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.487826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA AGCAGTCCAA GACGCCGAGG GCGCTTGCGA CTGGAACCAA GCTGACTTGC 
GCCGACAATA CCGGCGCACG GATCGTACAG ATCGTCTCGG TCTTCGGCTA CCATGGGGTT
CGCCGGCGTC AGCCCAAGAT GGGCCTTGGG GACATCGCGA CGGTAACCGT GAAGAAGGGC
ACGCCCGACA TGAGGAAAAA ACTAGTCCGG GCTGTCGTCA TCCGCCAGAA AAAGGAGATG
CGCCGCCCCA ATGGACTCCG CGTTTCCTTC GATGACAACG CTGTCGTTGT TGTGGATGAG
AAGAACGAAC CCAAAGGAAC CGAGATCAAG GGGCCGGTTG CCCGTGAAGT AGCAGAGCGG
TACCCGAAGC TCGGGTCGAT GGCTACCATC ATTGTGTAA
 
Protein sequence
MKAKQSKTPR ALATGTKLTC ADNTGARIVQ IVSVFGYHGV RRRQPKMGLG DIATVTVKKG 
TPDMRKKLVR AVVIRQKKEM RRPNGLRVSF DDNAVVVVDE KNEPKGTEIK GPVAREVAER
YPKLGSMATI IV