Gene Mboo_0536 details

Gene Information

• Locus tag: Mboo_0536
• Symbol: rps19p
• ID: 5411763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Methanoregula boonei 6A8
• Kingdom: Archaea
• Replicon accession: NC_009712
• Strand: +
• Start bp: 520818
• End bp: 521237
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640867755
• Product: 30S ribosomal protein S19P
• Protein accession: YP_001403697
• Protein GI: 154150079
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0185] Ribosomal protein S19
• TIGRFAM ID: [TIGR01025] ribosomal protein S19(archaeal)/S15(eukaryotic)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.336176
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.495782
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGCAC CAAAAAAGAC CCAGAAGAGA ATGCCCAGAC GGCGTGAGGA GTTCACCTAC 
CGCGGGTACA AGATCGATGA GCTTAAGGCG ATGGGATTAA GCGAACTCAT CCCCCTGATG 
CCCGCCCGTG CACGCCGCAA ATTCAACCGC GGGCTCAACC GCGGTGAAGA GACATTGCTT 
GAAAAGATCC GGGGCGGGGA CGAGAAGATC CGGACCCACC TGCGTGAAAT GATCGTCATG 
CCCGAGATGA TAGGGAAGAG CATCGAGATC TACAATGGCA AGGAATTCTT AAAAGTCGAG 
TTCCAGCCCG AGTCGGTCTT CCACTATCTG GGCGAATTTG CCCTCACCAG AAAGAGGGTC 
ACCCACGGTT CCGCTGGTAT CGGTGCAACG AGGGGCAGCA AATACGTACC GCTGAAGTGA 

 

Protein sequence

MAAPKKTQKR MPRRREEFTY RGYKIDELKA MGLSELIPLM PARARRKFNR GLNRGEETLL 
EKIRGGDEKI RTHLREMIVM PEMIGKSIEI YNGKEFLKVE FQPESVFHYL GEFALTRKRV 
THGSAGIGAT RGSKYVPLK