Gene Mboo_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0529 
Symbol 
ID5411756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp515049 
End bp515972 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID640867748 
Productgalactose-1-phosphate uridylyltransferase-like protein 
Protein accessionYP_001403690 
Protein GI154150072 
COG category[C] Energy production and conversion 
COG ID[COG1085] Galactose-1-phosphate uridylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.415748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGA CAACGGACGT AGCCACCAAA AGAGGGATAT TGCAGTACCG TGAGGAGCGA 
TTTACCGGCA TCAGATGCCG GATCAGTCCT GAACGGGTCA AGCGCCATAC ATCCCAGACA
CTCACCTTTC CGCGGGATTC GGCAGACTGT CCATTCTGCG AACAGAATAT TTTTTCGATT
ACCCCGGTCT TTCCCGATGG AAAGCGTATC CTCGTGGGGG AGAGCGTTAC ATTCCCGAAC
ATGTTCCCGT TTGCTGAAGG GCACACCGTT ACCGTGATCA CCCGTGCGCA TACCGTACCG
GAGTTTACCC GGGCCCAGAT CGCCGATGCG CTTCGGGCCC AGATTGAATC TCTTCTCCGT
TATGGGGGAT ACCCCAGCAT CAACTGGAAC TATCTCCCTT CTGCCGGGGC AAGTATCCTT
CATCCCCATA TGCAGGGAAT AAGCGACAGG TGCCCCACAT GGCTCGTGGA GAGATACCTG
TGCGCCGGGA AAGAATACCG GGCGAAGATC GGGGCATCGT ACTGGGATGC CGTGCGGGAA
CAGGAACGCT CTTCAGATCG TTTCCTGTTT GGGGACGAGA TCCTCTGGTC TGCCCATGCG
GTTCCCGTAG GAGAGCGGGA AGTCCGGGGA ATCCTTCCTA TTTCAAGCCT TAAGGAACTG
GAGGACTATA TGGAACCTCT TTCCGAAGGG ATACTCAGGA TAATCACTTT TTACCGAAAC
CTCGGAACAC AGGCTTTTAA CATGTCAATC TATTGCTGCC GGGATGAGAG TGAAGACTTT
TCTGCATTCT GCTCGCTGAT ATCCCGGATA AACCCAAATC CTCTCTCGAC CAGCGACTCG
GCATTCATGG AACGGATGCA TTGTGAGCCG GTCATTATGA CCCTCCCGGA AGAGATGGGA
GAAATGTACC GGGATCAAAA TTAA
 
Protein sequence
MFTTTDVATK RGILQYREER FTGIRCRISP ERVKRHTSQT LTFPRDSADC PFCEQNIFSI 
TPVFPDGKRI LVGESVTFPN MFPFAEGHTV TVITRAHTVP EFTRAQIADA LRAQIESLLR
YGGYPSINWN YLPSAGASIL HPHMQGISDR CPTWLVERYL CAGKEYRAKI GASYWDAVRE
QERSSDRFLF GDEILWSAHA VPVGEREVRG ILPISSLKEL EDYMEPLSEG ILRIITFYRN
LGTQAFNMSI YCCRDESEDF SAFCSLISRI NPNPLSTSDS AFMERMHCEP VIMTLPEEMG
EMYRDQN