Gene Mboo_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0525 
Symbol 
ID5411097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp509825 
End bp510268 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID640867744 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_001403686 
Protein GI154150068 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.26916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTGT CTGCAGCGGA GATTTCCCGT CGGTTATCAA GTTCACATGC AGATGAAAAA 
CTCACTATTA TGCCCTATAC CCAAGAGTGC CAGCAGCCGG CATCGTATGA TCTGAGGGTT
GCTGATGATA TCTTCCTCGC CCGGGGAACG TGTACCCTTG TCCCGAGTAT GGAACGGGTG
GAGTTTCCCC CGGATCTTGC CGGGACGCTC CGATGCCGGT CCTCATTTGG CCGTCGGGGG
GTGCTGTTGG GAGGGGGTTT TGTCGACCCG GGCTTCCGTG GACAGTTGAC ACTCTGCCTG
ACAAACATGG GACCGGAAGA TATCCACCTG CGCAAGGCCG AGCGTGTGGT CCAGATGATC
CTGCATGAAG TGAGGAACGG GAACGAACGT TATGCCGGGC GTTACCAGGA CAGCACCGGT
GCAGTGGGAG CAAAAAAGGC ATGA
 
Protein sequence
MILSAAEISR RLSSSHADEK LTIMPYTQEC QQPASYDLRV ADDIFLARGT CTLVPSMERV 
EFPPDLAGTL RCRSSFGRRG VLLGGGFVDP GFRGQLTLCL TNMGPEDIHL RKAERVVQMI
LHEVRNGNER YAGRYQDSTG AVGAKKA