| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0524 |
|---|
| Symbol | |
|---|
| ID | 5410845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 508190 |
|---|
| End bp | 509581 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640867742 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403685 |
|---|
| Protein GI | 154150067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.195293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAT CTCGTATTCG TTTCCTTTTT GCGCTGCTCT GCATTCTTGC CTTCTGCGGC
GCAGTACAGG CGACGAACCT GCTGATCACG GTGCAGGACA GTCTTGACAA CACTTCCATC
CCCCATGCAA CAGTGTACCT TAACGGGGCC AATGTAGGCC TCACCAATAA TGCCGGCCAG
TTCCTGCTCC AGTCCGGCCA AGGCGATTTC AACCTCCTTG TATCTATGGA CGGCTATGAT
GACTGGTCGG AAGTGGTCAG CAGCAATACC ACTGCACTTT CCGTCACCCT CAACCGCAGG
TCTCTCCTCC TGAACGTCAC CCTCTTTGAT TCCAATACCC TCGATCCGGT ATCCGGAGCT
ACTCTCGTTC TGACCTCGGC GAACGCCACC CAGAATGCGG CTACGGATAC CTACGGATCA
GCATCGTTCG GTGTTACCGC ATATACGATG TATTCCCTCA ATATCACCGC ACCGAATTAC
CAGCCGCGCA GTGAATCGGT CGAGGTGGAT TCCACAAACC AGAACGTTCA GTACTGGCTT
TTGTCCACAA ACCAGTACTC CTTTGTTATC CGGGATCAGA ACACCAATCT CCCGGTGACC
GGTGCAAGTA TTACCGTGAA TTCCGTGCTC CTTGGGACAA CCAATTCACG CGGGGTCCTG
ATTACACCCA TCAGCAGGAA TGTCCCCCTT ACCATCGTTG TACAAAAAAC AGGTTACCAG
ACCCTGAACC AGTATCTCAC CATCGGTCCC AACGAGGCTG TTGACTCTGT CAGCCTGATC
CCTGTTCCTG TCAGTGGTTT TGTCTTTGTG TACGATAAGC AGAACCAGCC GGTCAGCGGC
GCGGATGTCT CTCTCAACGG GACGGTGGTG GCAACCACTT CGGAATATGG CAGCGCTGCA
CTCCAGAATC TGGCACCCGG TACATACGCC ATTGTGGTGA GCAAGGCCGG TTATCTCCCG
GCAAACCAGC AGATCGATAT CTCCAGCGGA TCCAGCCAGT TCCCGGTGAC TCTCTCCCTT
GCCACGGTCA GCCAGACACT CTATGTCCAG GACTCTGACC AGAAAAACGT TGCCGGAGCG
GCGGTTCTCC TGAACGGGGC GTATGCGGGA ACGACGGATA CCCGGGGCGA GCTGGATACT
CAGCTGGTCT ATAACACGAC ATATAATATC ACCGTGACCC ATGACGGGTA TCTCCCCCAG
ACAGTCCAGC AGATCGTTCC TCTGGGGAAT ACCACCACGC CGCTTACCAT CACCCTCCAG
AAGAACATGG ACTGGGGATT TGTAACTCTT CTTGGGATAG GAATTCTTAT CGTGCTCTTC
ATCTTTGTTA TCATCCGTCT TGCCGGGCGC AGGACCCCCC ACCATTCGTC AGGAAGACGT
GACGAGATAT AA
|
|---|
| Protein sequence | MNASRIRFLF ALLCILAFCG AVQATNLLIT VQDSLDNTSI PHATVYLNGA NVGLTNNAGQ
FLLQSGQGDF NLLVSMDGYD DWSEVVSSNT TALSVTLNRR SLLLNVTLFD SNTLDPVSGA
TLVLTSANAT QNAATDTYGS ASFGVTAYTM YSLNITAPNY QPRSESVEVD STNQNVQYWL
LSTNQYSFVI RDQNTNLPVT GASITVNSVL LGTTNSRGVL ITPISRNVPL TIVVQKTGYQ
TLNQYLTIGP NEAVDSVSLI PVPVSGFVFV YDKQNQPVSG ADVSLNGTVV ATTSEYGSAA
LQNLAPGTYA IVVSKAGYLP ANQQIDISSG SSQFPVTLSL ATVSQTLYVQ DSDQKNVAGA
AVLLNGAYAG TTDTRGELDT QLVYNTTYNI TVTHDGYLPQ TVQQIVPLGN TTTPLTITLQ
KNMDWGFVTL LGIGILIVLF IFVIIRLAGR RTPHHSSGRR DEI
|
|---|
| |