| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0522 |
|---|
| Symbol | |
|---|
| ID | 5410843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 503555 |
|---|
| End bp | 506380 |
|---|
| Gene Length | 2826 bp |
|---|
| Protein Length | 941 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640867740 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403683 |
|---|
| Protein GI | 154150065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.057808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.329166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC GATTAACGAT TGCACTTATT GCACTCGTGG CACTGGTGCT TGTTGCAGTA
CTGCCGGCTT CGGCAACGTA CTACAATGTC AACAACACCG TTAACGCCCC GGGCGGATCA
GTGTATATTG GAGAACAGCA GTTGAACATC CAGCCTCTTG TAAATAGCTA CCCGGCAGGG
GGAGCAGTCT CTATCGGCTG GTGGGCCTCC GCTGCGTCTG TCACTTCTAC AGCACCGTCG
CAGCAGTATA ACGTAAGCTC ACTTAACCCC TCCTCGTTCT ATGCTTCGCC GAGCGGGTAT
GGAAACTACT TGGGTAACTG GTACGCGATC AATGGATCTG GTACCCCGAA CACGACAGCT
GCATTCTTTA CTGTCGTGGA CCCAAGCTTG GCTATTGATG TCTGGGATAT CAACACCTCG
ACAACCGTAT CCAGCGGTAC CGTGATTCAG GGCGACCTGC TTACCTTCCG TATTAACACG
AACCTGCAGT CGGCAATCGA CCCGAACTAC CGTACGTCCT CTGTCACCCC AGCTGTCGGC
AGCGTTGATA TTCAGGTAAA GCCTTCTTCC GGAAACACCT ATGCCTCGCT GTTTGTCAAC
TCGACCAGCG GAAGCAGCAC CTACAACACT CAGAATATCC GGTTCCAGCC GGTTAACCAG
TCCCTTTGGT TCTGGGGTAT CGCTGGCAAC GGTGTGCCCT CGACCACTGC CACTAGTGGC
GCTGGCGCTA TCCAGTATGC CTGGGCAACC GGTGCAACTG ATTCAACCGG AAACAATGCG
TATCCTGCCG GTGTCTACAC CGTCACCGCC CAGTCTGACA TCAACGGTCA GTACGACAAC
TACCTGAATG GTGGCGCGTA CTATACCGGT AAGACGATCA GCCAGCCTGT AACGGTCACG
ATCGCGTCCA ACACGGTTTC GATCTCCGCA AACGTGGACT CCGTTGTTCG CAGCAAGCCC
TTCTCAGTTA CTATCACGGG CAAGCCCGGA GCAACCTACC ACCTGTGGGT CAAGGGCGTC
AGCTCGCTGG ATGGCACCTA TGACAACCAG CCGCCCATCA TCTCCGCCAA CCAGGTTGGA
GTTACCTTTG ATAACCAGTC TGACTCGAAT GCATTCGCCT ACTTCCCGAC TTCCTCTGAG
TTCCCGCTTA ACGCAAACAC GGCTTACGCT AACGGTAACT ACACCTACCA GAATGGTGTC
CAGCTCTGGA ACGATGTTGC CCACGGCACG TATGGATCGA CCGGTCTGAT TCTCGGTAAC
GGTACCTTTG AGTACGCCAA CGTGACCCTC AACTCCGCCG GTACCAGGAC CATCCAGTGG
ACAACTACCA ACTGGACCAA GGCCCAGCAG TACACCATCC GTGTTGAGCA GAATTTCGGT
GGCGCAACCG GTTACAAGTA CGATGAAGTA AAGGTGCAGG TCCAGAAGGG CGCAGTCACC
ATCGTCGCAG CTGGTTCCCA GAGTTACTAC CTCGGTGAAG AGGTTCAGTT CTCCGGTACC
AACACTGAGT CCCAGACTAC ATACCTGTTC ATCACCGGCC CCAACCTGCC GACCCAGGGT
GGAGCACTCT GGAGCACAAA CCCGCGGTAT GCAGGATCTG CCAACCCGGG TATCACCAAT
GGAAACGCCT CTGACTTCCA GCAGGTAAGT GTCAACGGTG ACAACACCTG GTCCTGGAAC
TGGGGAACCA CAACGGTTGC GCTCGATGCA GGTACCTACA CGGTTTATGC AGTGAGCCAG
CCCAATGATG CAAACCACCT GAGCAACGCA GCATACGGCA CGGTTTCCAT CATCATCAAG
AAGCCCTTCG TCAGTGCGAC TGCATCCCAG TCCACCGTTG CACAGGGTGA CCCAATCTAC
ATTACCGGTA CCGCAGAGGG CCAGCCCAGT CAGGGTGTCC AGCTCTGGAT CCTCGGTAAG
AACTACGCAC TCGTAGCAAC TGAAGCCGTA AACTCTGACT CGTCGTTCTC GTACGAGATC
AAGGGCGCAA CGACCTCAAC CATGTACTCT GGTCAGTACT TCGTTGTCGT TCAGCACCCG
ATGCAGAACG GTGTATTTGA TGTCGCACCC GCCACCGCAA GTGGTACCGT GACATACCCG
CAGAACTCAA ACGGCGCTTC AGTGTATGTG TGGAACGACA ACCCGTCCAA CCCCGGTGTC
TTCACTGCAA ATGGTGCAAC AAATGACTTC GCTCTCACCG GTGCCGGTAG CTTACAGGGC
TCCGATGCCG CAGAGGCACT GGTCCAGGCA CTCAACAGCG CAAATGTTGA TGATACCTAC
ACCAAACTCC AGTTCCTCGT AGAGACCCCC GTTATCACCA TCACCCCGGT TGGCGACCAC
TCCGTTGGTG ACAAGTTCAC CATCACGGCA ACCACCAACC TCGCAGTAGG TGACAACGTC
CTCTTCACAG TGTACTCATC ATCATTCCAG CCGACTGACA AGACCCAGAG CGGTGAGTTC
AGCGGCGCAT CAGGCACTGT AGCAGTCACG CAGGGCACCA GCGGCCTTAA CGCTCTCTCG
TTCGATGTTG ACGCATCCAC GTTCAAGCCC GACGAGTACC TCGTTACCGC CACCGCAGTC
GGTCTCCCGG ACACGAACAA CGTCCCGACC GGCACTGCAC TGTTCAATGT CCTGCAGGCA
TCGGCCCAGA CTGCAACCCC CACACCGGTT GCATCTGTGA CCACTGCAGC AGTTCAGACA
ACGGTTCCAA CCCCGGTTCC GACCACTGCA ACCCCCACCA AGACCCCGAC ACAGCCCGGG
TTTGGTGCAC TGGTTGCACT GATTGGTCTC GGTGCAGTTG CACTCTTTGT CGTGCGCAAG
CACTGA
|
|---|
| Protein sequence | MTKRLTIALI ALVALVLVAV LPASATYYNV NNTVNAPGGS VYIGEQQLNI QPLVNSYPAG
GAVSIGWWAS AASVTSTAPS QQYNVSSLNP SSFYASPSGY GNYLGNWYAI NGSGTPNTTA
AFFTVVDPSL AIDVWDINTS TTVSSGTVIQ GDLLTFRINT NLQSAIDPNY RTSSVTPAVG
SVDIQVKPSS GNTYASLFVN STSGSSTYNT QNIRFQPVNQ SLWFWGIAGN GVPSTTATSG
AGAIQYAWAT GATDSTGNNA YPAGVYTVTA QSDINGQYDN YLNGGAYYTG KTISQPVTVT
IASNTVSISA NVDSVVRSKP FSVTITGKPG ATYHLWVKGV SSLDGTYDNQ PPIISANQVG
VTFDNQSDSN AFAYFPTSSE FPLNANTAYA NGNYTYQNGV QLWNDVAHGT YGSTGLILGN
GTFEYANVTL NSAGTRTIQW TTTNWTKAQQ YTIRVEQNFG GATGYKYDEV KVQVQKGAVT
IVAAGSQSYY LGEEVQFSGT NTESQTTYLF ITGPNLPTQG GALWSTNPRY AGSANPGITN
GNASDFQQVS VNGDNTWSWN WGTTTVALDA GTYTVYAVSQ PNDANHLSNA AYGTVSIIIK
KPFVSATASQ STVAQGDPIY ITGTAEGQPS QGVQLWILGK NYALVATEAV NSDSSFSYEI
KGATTSTMYS GQYFVVVQHP MQNGVFDVAP ATASGTVTYP QNSNGASVYV WNDNPSNPGV
FTANGATNDF ALTGAGSLQG SDAAEALVQA LNSANVDDTY TKLQFLVETP VITITPVGDH
SVGDKFTITA TTNLAVGDNV LFTVYSSSFQ PTDKTQSGEF SGASGTVAVT QGTSGLNALS
FDVDASTFKP DEYLVTATAV GLPDTNNVPT GTALFNVLQA SAQTATPTPV ASVTTAAVQT
TVPTPVPTTA TPTKTPTQPG FGALVALIGL GAVALFVVRK H
|
|---|
| |