Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0514 |
Symbol | |
ID | 5410835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 495643 |
End bp | 496335 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640867731 |
Product | uroporphyrinogen-III synthase-like protein |
Protein accession | YP_001403675 |
Protein GI | 154150057 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CAGTCACCCG TCTTGCAGGA AAGGAGGGCC GGGATGTGGC CCGGTGCGCA GCATTCGGGC ATGCGTGCTA CAGCATCCAT CCCCTTCGAT CAGAGATACG GGAGGATGTT GTTGCGGCAT TTGCCGACGC TACCGACCGC GGGGAGTTCG ACTGCATATT CTTTACGAGT GCACTGCCGG CAAAGATCCT TGCCCCGCGG CTTGAAAAGA CCCCCCGGAT CATCGCGATC GGCCCCGAGA CTGCAAGGGA GCTGACGCAG TGCAGCATTG CCTGCGAGAC CCTGCCCGGG TTCTATTCCC GGGATTTTGT CCCGTACCTG GGTGAATGGA TCAAAGGGAA AAAGATCGGT CTCCCCCGGG CCGATGTCCC CAATGCCCCC CTTATCGATG CAATCGCAAA GGCAGGGGGG ATACCACGGG AGTTTCGCTG CTACCGGCTT GTGCCCACCA ACGAGTCGCT TGACCTGCAC CCTGCAGAAG CCGTACTTTT TACAAGCGCA ATGTCGTATA CCAGTGCAGT CTGGACGCCG CGGCCAGACC TGCTGGTAAT GGCAATAGGG GAAATTACTG CAGATGCGAT GAGATGCGGG GGAACATTCC CGACCATCGT GGGGGATGGC TCGCTTGAAG GGACACTTAC GGCATTGAAC GAGTACTGCG GGAGGACCAG GATCATACGA TGA
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Protein sequence | MKIAVTRLAG KEGRDVARCA AFGHACYSIH PLRSEIREDV VAAFADATDR GEFDCIFFTS ALPAKILAPR LEKTPRIIAI GPETARELTQ CSIACETLPG FYSRDFVPYL GEWIKGKKIG LPRADVPNAP LIDAIAKAGG IPREFRCYRL VPTNESLDLH PAEAVLFTSA MSYTSAVWTP RPDLLVMAIG EITADAMRCG GTFPTIVGDG SLEGTLTALN EYCGRTRIIR
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