Gene Mboo_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0514 
Symbol 
ID5410835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp495643 
End bp496335 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID640867731 
Producturoporphyrinogen-III synthase-like protein 
Protein accessionYP_001403675 
Protein GI154150057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CAGTCACCCG TCTTGCAGGA AAGGAGGGCC GGGATGTGGC CCGGTGCGCA 
GCATTCGGGC ATGCGTGCTA CAGCATCCAT CCCCTTCGAT CAGAGATACG GGAGGATGTT
GTTGCGGCAT TTGCCGACGC TACCGACCGC GGGGAGTTCG ACTGCATATT CTTTACGAGT
GCACTGCCGG CAAAGATCCT TGCCCCGCGG CTTGAAAAGA CCCCCCGGAT CATCGCGATC
GGCCCCGAGA CTGCAAGGGA GCTGACGCAG TGCAGCATTG CCTGCGAGAC CCTGCCCGGG
TTCTATTCCC GGGATTTTGT CCCGTACCTG GGTGAATGGA TCAAAGGGAA AAAGATCGGT
CTCCCCCGGG CCGATGTCCC CAATGCCCCC CTTATCGATG CAATCGCAAA GGCAGGGGGG
ATACCACGGG AGTTTCGCTG CTACCGGCTT GTGCCCACCA ACGAGTCGCT TGACCTGCAC
CCTGCAGAAG CCGTACTTTT TACAAGCGCA ATGTCGTATA CCAGTGCAGT CTGGACGCCG
CGGCCAGACC TGCTGGTAAT GGCAATAGGG GAAATTACTG CAGATGCGAT GAGATGCGGG
GGAACATTCC CGACCATCGT GGGGGATGGC TCGCTTGAAG GGACACTTAC GGCATTGAAC
GAGTACTGCG GGAGGACCAG GATCATACGA TGA
 
Protein sequence
MKIAVTRLAG KEGRDVARCA AFGHACYSIH PLRSEIREDV VAAFADATDR GEFDCIFFTS 
ALPAKILAPR LEKTPRIIAI GPETARELTQ CSIACETLPG FYSRDFVPYL GEWIKGKKIG
LPRADVPNAP LIDAIAKAGG IPREFRCYRL VPTNESLDLH PAEAVLFTSA MSYTSAVWTP
RPDLLVMAIG EITADAMRCG GTFPTIVGDG SLEGTLTALN EYCGRTRIIR