Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0512 |
Symbol | |
ID | 5411332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 493425 |
End bp | 494294 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640867728 |
Product | hypothetical protein |
Protein accession | YP_001403673 |
Protein GI | 154150055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.269332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCTGTC AGAAATGCGG AAAGGAGAAT CCTGACAACG CCGCGTTTTG TAATTCCTGC GGTGCGGATC TCCGTTCGGC ACCGGTTGCA CCAATCCCCC AACCAGAAAC GATCATATCG TCATGTTCTG CCGGAAAAAG ACGGAAAATT ATATTATATG GGGTAATTGT TTGTATCGTC GTCGTTATAC TAATTGCGGG CGCAATATCT CTCTGGAATA ACCAAGATTG GAATTCATAT TGTTCCAAGA ATTATCCCGG TAGCACGTAC AATTCCACAA CTAACACTTG CGAAAACCCG GCGGCATCAA CGATACCATC ACCCGCACAA ATTGGGCCGC ATGCAGCTCC AATATACCAA AGAGGGGATA TAGTTTCGAC TGATAATGAG GGCGGGGGCG GAACTCTTAT CGAGGGATAT AATCCAGCAA ACGATACTTA CGTTGTTACA TGGGTGGATC AGAGTTTAGA TGGGACTTGG TATCACGGGA CAGATCCGAC TATTTATGCG GTTGATTCAT GGGATAGGGT AGATCTTGAA AACAAAAACC CTTATAAAAT CGGTACGGTA GATCCAAACA ATTTGCCATC CTACGCCTCA AGTGCTCCCC TAGTTCTGAC CGGGAATGGA GACAACATTA CGGAATTTGG CACGCCGCAG TCGGGAGCGT ATATATTTAC AAGCACATAT TCGGGACAGG GAAATTTCGT AGTTTGGATT AAGGATAGTA ATGGATATGA GGTTGGTTTA GCTGCAAATA CTGTCGATGC GAGTACTGAT TCGAAAATGG TGCATCTGGA TACCGATACA TATTACGCAG AAGTAACTGC AAACGGCCCA TGGACTTTAA CAATAACACC ACCATCATAA
|
Protein sequence | MFCQKCGKEN PDNAAFCNSC GADLRSAPVA PIPQPETIIS SCSAGKRRKI ILYGVIVCIV VVILIAGAIS LWNNQDWNSY CSKNYPGSTY NSTTNTCENP AASTIPSPAQ IGPHAAPIYQ RGDIVSTDNE GGGGTLIEGY NPANDTYVVT WVDQSLDGTW YHGTDPTIYA VDSWDRVDLE NKNPYKIGTV DPNNLPSYAS SAPLVLTGNG DNITEFGTPQ SGAYIFTSTY SGQGNFVVWI KDSNGYEVGL AANTVDASTD SKMVHLDTDT YYAEVTANGP WTLTITPPS
|
| |