| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0503 |
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| Symbol | |
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| ID | 5411070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 484455 |
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| End bp | 486227 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640867719 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001403664 |
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| Protein GI | 154150046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.163144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAC ACTATCTTCT CGGGAATGAA GCCATAGCCC ACGCCTGTCT TGAATCGGGC
ATCGGGTTTG TAAGCGGGTA CCCCGGCACC CCGTCATCGG AAGTGGTCGA TGTGCTCCGT
GCGCAGAAAG ACCCGCCCTT TTATCTCGAA TGGTCGGTAA ACGAGAAAGT TGCCCTTGAA
AATGCTCTCG CTGCCGCGTG GTGCGGGCTG CGGGCGATCT GCACGATGAA GCACGTAGGC
CTTAACGTTG CCGCTGATCC GCTGATGACC AGCGCCTATA CCGGGGTAAC CGGTGGCCTT
GTGATCCTGA GTGCCGATGA TCCGTTCGCA CACAGTTCCC AGAACGAACA GGATACGCGG
TGCTATGCCC ATTTTGCCCG GCTCCCCTGC CTCGATCCCG CAGGTGTGCA GGAGGCACAC
GATATGGTCG GTACCGCGTT TGCCCTTTCC GAGGAGTTTC GCCTGCCGGT GCTGTTCCGT
CCCACCACCC GGATCTGCCA CTCCAAAGGT GATGTGGCGC TGGGCGCTGT TGTACCGAAT
GAGCGAAAAG GTGAGTTCCA TAAGGATCCC CGGCAATATG TCGTGATTCC GGCCCACACG
CGGATCCTGC ACAAGAAACT CAACGAAAAG CAGCCCGCTC TCAAAAAACG CCTTGTCGAA
CTGGGGCTCA ACGCGTACAC CATCAGCGGA AAGACCGCTG TCATCGCGAG CGGGATCGGG
GCAGCCTACG TTCAGGAGCT CCTCCCTCCC AACGTTTCGT TCATGAAGAT CGGGGCATAC
CCCATTGATG AGGCTTGGTT GGGGGAATTT GCCAAAAAGC ACGAGAAGAT CCTGGTCATC
GAGGAACTTG CCCCGGTGGT CGAGGAGGCT GTCCGGCAGG TTGCCGGGTG TGTTCCGGTC
TTTGGGAAGA TCAACGGGTA CGCGCCGTAC GAAGGGGAAC TTTCGCCGGG CGTGGTCGCC
GGGATCATGG TAAAGGCCGG GTTTTTGGAG AAAAACCCGT TTGCCGCTCC CATCCCTGTT
CCGGACCTTC CCCTGCGCCC CCCCATCCTC TGCGCCGGCT GCCACCACCG CGCGGCGTTC
TATGCGGCAA AGAAGGTCTT TGGCCCGACC GCAGTCTACC CAAGCGACAT CGGATGCTAC
ACGCTGGGGC TCCAGCTGGG CGCAGTGGAC ACCACGATCT GTATGGGTGC ATCCATCACG
GTCGGGAGCG GGATCGCGCA TTCCGATCCG TTGCGTGATG TGGTCTGCAC AATCGGCGAT
TCGACGTTCC TGCACACGGG TATCCAGGGG CTGATGAATG CGGTGTACAA CGGTGCAAAC
ATGACCGTGA TCATCCTCGA CAACCGGATC ACCGCGATGA CCGGCCACCA GCCCAACCCG
AATACCGGGG TAACCGCTAC CGGTGTGGAG ACTCCTCCGG TCTCCCTTGA TGCGGTTTGC
CGCGCCTGTG GGGCGACCTT TGTCGAAACG GTCGATCCCT ACGACATGAC CGGCATGCTC
CGGGTGCTTG AGGATGCAAA GGCCAAAAAG GGCGTTAAGG TGATCATCGC AAAACAGATG
TGCGTGATCG TGGCCCGACG CACCGGGGTA AAACGGGGCC GCTATGCCGT CAACCCGGAG
ATCTGTACCG GCTGCGGCAC CTGCGTGCGC TTTGGCTGCC CGGCAATCGA GCTTGTGGAC
AAGAAGGCCC GGATCAACGA GCTCTGCAGC GGGTGTGCGG TCTGTGCCCG GCTCTGTCCT
GTCGGGGCGA TATCCCTGGA GGTGCGGAGA TGA
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| Protein sequence | MERHYLLGNE AIAHACLESG IGFVSGYPGT PSSEVVDVLR AQKDPPFYLE WSVNEKVALE
NALAAAWCGL RAICTMKHVG LNVAADPLMT SAYTGVTGGL VILSADDPFA HSSQNEQDTR
CYAHFARLPC LDPAGVQEAH DMVGTAFALS EEFRLPVLFR PTTRICHSKG DVALGAVVPN
ERKGEFHKDP RQYVVIPAHT RILHKKLNEK QPALKKRLVE LGLNAYTISG KTAVIASGIG
AAYVQELLPP NVSFMKIGAY PIDEAWLGEF AKKHEKILVI EELAPVVEEA VRQVAGCVPV
FGKINGYAPY EGELSPGVVA GIMVKAGFLE KNPFAAPIPV PDLPLRPPIL CAGCHHRAAF
YAAKKVFGPT AVYPSDIGCY TLGLQLGAVD TTICMGASIT VGSGIAHSDP LRDVVCTIGD
STFLHTGIQG LMNAVYNGAN MTVIILDNRI TAMTGHQPNP NTGVTATGVE TPPVSLDAVC
RACGATFVET VDPYDMTGML RVLEDAKAKK GVKVIIAKQM CVIVARRTGV KRGRYAVNPE
ICTGCGTCVR FGCPAIELVD KKARINELCS GCAVCARLCP VGAISLEVRR
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