| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0501 |
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| Symbol | |
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| ID | 5411800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 482243 |
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| End bp | 483535 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867716 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001403662 |
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| Protein GI | 154150044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGA ACCGATCTAC GCGTGGCAGC CCTGATCCGG GCGATCTGTT TGCCGGTCTT
GCCGGCAAAC GGGTGTATAT CGAGACCTAC GGGTGCCGCT ATAACTTCGG CGACACGGCG
AATCTGGTTG CCGTCCTTAA GCACTACGGA AGTACCGTTG TCCCTGCCCC GGAAGACGCG
GATGCGGTCG TGGTCAATAC CTGCACGGTG GTCGGTCCTA CGGAACGGCG CATGCTCCGC
CGCCTTTCTG CATTGCAGGA GAAACCGCTT TTTGTTACCG GCTGCATGCC GCTTGTCCAG
CGCGAAGCGA TCCTTGCGGT CTGTTCACCG GTTATTATTC ATCCGGATAC GATCCGCGAA
GCCTCCCGGG CCCTTATGAC CGTTGGCTCC GAAAGCGTAG GGATCGTCCA GATTGCCCAG
GGCTGCCTTG GGCGGTGCAC CTACTGCATC ACGCGCAGGG CCCGGGGGCC TCTCAGGAGT
TTCCCTGTCC AGGAGATCCG AAATAAAATC GAAGAATATG TCAGGGCTGG CGCATACGAG
ATCCAGCTGA CCGCACAGGA TACCAGCGCA TGGGGACGGG ATACGGGGCA GCGCCTGCCG
GATCTGCTTA CCGCTCTCTC TTCCATCCCG GGAAATTTCC GGCTCCGGGT CGGAATGATG
AACCCGGCTA CTACCCTGGG TATCCTTGAC GATCTGATCG ATGCCTTTGC CAGCGATCGG
CTCTTCCGGT TCGTGCACCT GCCGGTCCAG TCGGGATCCG ATCGCATTCT CGAACAGATG
GGGCGGGGCT ATACGGTCCG GGAATTCGAG GAGATCGTCT CTGCATTCCG CGGGCGATAC
CCGGATATCT CCATTGCAAC CGATTTCATC GTAGGGTTCC CGGGGGAGAC CGAAGAGGAC
TTCTCCCGAT CCCTTGAGCT GATCGGGCGG ATCCGGCCCG CCAAGGTTAA TGTGACACGA
TATTCGCCGC GGCCGTTCAC CGGGCCGTTT GAGGAAAAGG ACTTTCCGGA TGCAGTAAAA
AAAGATCGCT CCCGTATTCT GAACGCGTAC GCGGAGGAGC AGTATGTCGC ACTCAACCGT
CCTCTTCTCG GGACTATGGT CTTCTGCGTA GTCACCGAGA AGATCCGGCC CGGCTCGGTC
ATGGCCCGGA CCGCCTCGTA CCAGGGCCTC GTCATCGGTG AGGAGCTGTC TGTCGGGACT
GCTGCAGTTG TCCGGCTCAA AAAAGACCGG AAGTACTTCT TTATGGGGGA TCTCCTCTCC
CGGGATCCAT CTCATATGCG GGGGGTCGAT TAA
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| Protein sequence | MDGNRSTRGS PDPGDLFAGL AGKRVYIETY GCRYNFGDTA NLVAVLKHYG STVVPAPEDA
DAVVVNTCTV VGPTERRMLR RLSALQEKPL FVTGCMPLVQ REAILAVCSP VIIHPDTIRE
ASRALMTVGS ESVGIVQIAQ GCLGRCTYCI TRRARGPLRS FPVQEIRNKI EEYVRAGAYE
IQLTAQDTSA WGRDTGQRLP DLLTALSSIP GNFRLRVGMM NPATTLGILD DLIDAFASDR
LFRFVHLPVQ SGSDRILEQM GRGYTVREFE EIVSAFRGRY PDISIATDFI VGFPGETEED
FSRSLELIGR IRPAKVNVTR YSPRPFTGPF EEKDFPDAVK KDRSRILNAY AEEQYVALNR
PLLGTMVFCV VTEKIRPGSV MARTASYQGL VIGEELSVGT AAVVRLKKDR KYFFMGDLLS
RDPSHMRGVD
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