Gene Mboo_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0500 
Symbol 
ID5411799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp481379 
End bp482137 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID640867715 
Productaspartate dehydrogenase 
Protein accessionYP_001403661 
Protein GI154150043 
COG category[R] General function prediction only 
COG ID[COG1712] Predicted dinucleotide-utilizing enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.431353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGA TCGGGCTTTT GGGCTGCGGC AATATCGGGC ATATCATCGC CCGGCACGCG 
GAAGGGTTCA CGATCCCGGC AGTCTACGAC ACCAAACCTG AACGGGCAAA AGAGATCGCA
GATCTCTGCA ACGGGAAAGC ATACGGGGAC TTTGCAGCGT TCCTCGAAGC AGACACCGAT
ATCGTGGTTG AGGCCGCTTC GGTGGGTGCG GCGCGGGCGC ACGCACAGGA AGTTCTCGAA
CACAAAAAGA ACCTCGTTAT TATGAGCGTG GGAGCGCTTA CCGATCAGGA ACTCAGGGAG
GGCCTTGTGG CTGTGGCACG GCAGACCGGG ACAAAGATCT ATGTCCCGAG CGGAGCGATT
TTCGGGCTGG ACAACGTAAA GATAGGGCAG ATCTCCCCCA TCTCGAAGCT GCTCTTAAAG
ACCACCAAGA GCCCGCAATC CCTTGGCCTC GATGCACCAA TCCGCCGGCG GATCTTCTCC
GGCAAGGCAC ATGAGTGCAT CAAATTGTAT CCCAAGAACG TGAATGTCTC AGTTGCCATG
GGTCTTGCAG CCGGCCAGGA TGCGGACGTG GAACTCTGGG TGGATCCGGC GGCAGACAAG
AATATCCATG AGCTCTTCAT TGAGGGAGAC TTTGGCGAGA CCTACATCCG GGTGACCAAT
GTGCCCAGCC CCGAGAACCC GGCAACAAGT TACCTTGCGG CACTCTCCAT CCTCTCGCTC
TTAAAAAACC TTGACAGCCC GCTGGTCATC GGGACATAA
 
Protein sequence
MMRIGLLGCG NIGHIIARHA EGFTIPAVYD TKPERAKEIA DLCNGKAYGD FAAFLEADTD 
IVVEAASVGA ARAHAQEVLE HKKNLVIMSV GALTDQELRE GLVAVARQTG TKIYVPSGAI
FGLDNVKIGQ ISPISKLLLK TTKSPQSLGL DAPIRRRIFS GKAHECIKLY PKNVNVSVAM
GLAAGQDADV ELWVDPAADK NIHELFIEGD FGETYIRVTN VPSPENPATS YLAALSILSL
LKNLDSPLVI GT