Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0500 |
Symbol | |
ID | 5411799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 481379 |
End bp | 482137 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640867715 |
Product | aspartate dehydrogenase |
Protein accession | YP_001403661 |
Protein GI | 154150043 |
COG category | [R] General function prediction only |
COG ID | [COG1712] Predicted dinucleotide-utilizing enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.431353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGA TCGGGCTTTT GGGCTGCGGC AATATCGGGC ATATCATCGC CCGGCACGCG GAAGGGTTCA CGATCCCGGC AGTCTACGAC ACCAAACCTG AACGGGCAAA AGAGATCGCA GATCTCTGCA ACGGGAAAGC ATACGGGGAC TTTGCAGCGT TCCTCGAAGC AGACACCGAT ATCGTGGTTG AGGCCGCTTC GGTGGGTGCG GCGCGGGCGC ACGCACAGGA AGTTCTCGAA CACAAAAAGA ACCTCGTTAT TATGAGCGTG GGAGCGCTTA CCGATCAGGA ACTCAGGGAG GGCCTTGTGG CTGTGGCACG GCAGACCGGG ACAAAGATCT ATGTCCCGAG CGGAGCGATT TTCGGGCTGG ACAACGTAAA GATAGGGCAG ATCTCCCCCA TCTCGAAGCT GCTCTTAAAG ACCACCAAGA GCCCGCAATC CCTTGGCCTC GATGCACCAA TCCGCCGGCG GATCTTCTCC GGCAAGGCAC ATGAGTGCAT CAAATTGTAT CCCAAGAACG TGAATGTCTC AGTTGCCATG GGTCTTGCAG CCGGCCAGGA TGCGGACGTG GAACTCTGGG TGGATCCGGC GGCAGACAAG AATATCCATG AGCTCTTCAT TGAGGGAGAC TTTGGCGAGA CCTACATCCG GGTGACCAAT GTGCCCAGCC CCGAGAACCC GGCAACAAGT TACCTTGCGG CACTCTCCAT CCTCTCGCTC TTAAAAAACC TTGACAGCCC GCTGGTCATC GGGACATAA
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Protein sequence | MMRIGLLGCG NIGHIIARHA EGFTIPAVYD TKPERAKEIA DLCNGKAYGD FAAFLEADTD IVVEAASVGA ARAHAQEVLE HKKNLVIMSV GALTDQELRE GLVAVARQTG TKIYVPSGAI FGLDNVKIGQ ISPISKLLLK TTKSPQSLGL DAPIRRRIFS GKAHECIKLY PKNVNVSVAM GLAAGQDADV ELWVDPAADK NIHELFIEGD FGETYIRVTN VPSPENPATS YLAALSILSL LKNLDSPLVI GT
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