Gene Mboo_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0488 
Symbol 
ID5410173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp471619 
End bp472752 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content59% 
IMG OID640867700 
Productpeptidase M24 
Protein accessionYP_001403649 
Protein GI154150031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGG ATCCACTGGA CGCTGCCATG AAGAAGTGCG GGGCGGATGC CTTTGTGCAC 
TATGCTACAG GTGAAGAGGC GGACATGCGG TACCTTACCC GGTTCGTGAT GCATGATCCC
TTTGTCTTTT TTAAGCGGCG CAGGCAACCG GGCACCATCA TCGTGCCCCA GATGGAGGCG
GAGCGGGCAT CACGGGAATC AACGACTTCG GTGATGACGC GCACCCAGGC AGGGCTCCCC
GATATTGTCA AAAAAGAAAA GGATCCCTGG AAGGCCGCAG CAAAGATGAT CGCCGGCCAG
GCAGGAAAGA ACCTGCTTGT TTCTCCTGCG CTTCCCGCCG CGCTCCTGCG CGCACTTGAG
GAGCACGGCC ATGTGATCGT TGACAATGGC ACCGTAGAGA GAGTCCGGGC AATAAAGAGC
CCCGGGGAGA TCCGGCTCAT GCAGGCTGTG CAGAAGAAGA CCGAGCGTGC AATGGCGCTC
GGGATCTCCC TCATCAGCCA TGCCACCGTA AAAAAAGGCA TCCTGTACCA CAACGGCGCA
CCGCTCACCT CTGAACTTGT CCGTATTGCG ATGCACAAGC AGCTGATGGA TGAAGGGTGC
CGCGCCGTGG AGACCATCAT CTCGTGCGGA GAGGATACCG CCTTCCCCCA CATTATCGGG
AGCGGGGCCC TAAAGCCGCA TGAGCCCATC GTGATCGACA TGTTCCCACG GGATGAGGCA
TCGGGGTATT ACGCGGATAT GACCCGGACA GTCTCGAAAG GAAAGCCCAG CCAGAAGATC
ACCGAGATGT ACGAGGCAGT AAAAGAGGCC CAGCAGATCG GTATTGCAAC AATAAAAGCC
GGGGTGTCGG GGGCAGATGT ACATAACGCC GTGGTGGACT ATTTCAAAAG CAGAGGATAC
GAGAGTGACA CGAGGGGGTT TATCCATAAT CTCGGGCACG GCGTCGGGCT TCAGGTCCAT
GAGCTCCCCA CGGTCGGACC CGCAGGAGGC GCACTCGAAG CCGGGTCGGT GGTCACGGTT
GAACCCGGCT TGTACTATCC CGGCGTCGGG GGCATACGGC TGGAGGATAT GGGCGCAGTA
CGTGCCCGGC AGTTTGCCGG TTTCACGCAG TTTGAGGAGA CGCTGATCGT ATGA
 
Protein sequence
MAMDPLDAAM KKCGADAFVH YATGEEADMR YLTRFVMHDP FVFFKRRRQP GTIIVPQMEA 
ERASRESTTS VMTRTQAGLP DIVKKEKDPW KAAAKMIAGQ AGKNLLVSPA LPAALLRALE
EHGHVIVDNG TVERVRAIKS PGEIRLMQAV QKKTERAMAL GISLISHATV KKGILYHNGA
PLTSELVRIA MHKQLMDEGC RAVETIISCG EDTAFPHIIG SGALKPHEPI VIDMFPRDEA
SGYYADMTRT VSKGKPSQKI TEMYEAVKEA QQIGIATIKA GVSGADVHNA VVDYFKSRGY
ESDTRGFIHN LGHGVGLQVH ELPTVGPAGG ALEAGSVVTV EPGLYYPGVG GIRLEDMGAV
RARQFAGFTQ FEETLIV