Gene Mboo_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0486 
Symbol 
ID5410171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp469416 
End bp470690 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content54% 
IMG OID640867698 
ProductATPase central domain-containing protein 
Protein accessionYP_001403647 
Protein GI154150029 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAG ATTTGGAAAG CCTGCGCATC ATGGAAGTCC TGCTGACTGC AGAAATTTTC 
AACCAGAACC CGACTCTCGA TCTCAATGAC CTGACGCCGG CCTGTCGGGA GATCTTCTGC
TCCGGGGATA CCAAATCCAT CAAACGGCCG GTCTATGTGA GCGACGGGCT GATGAAGCGC
ACGCTCAATA TTGCGGATGC ACACGATAAG ATCGCTAAAA ATCCGTTTGT CTCCTACGAG
GAGTTCGGTC AGCGCCTGAA GATAACAACA CTCCAGCCGG CGGCAGAATG GTTCCTTGCC
CAAGGGGGAA AAGATCTCAT CCGGCAGAAC CCGGCGCTTG CCTTTTTCTT TGAATCGTTC
AACGGTACGG GAGTTTCGTA CCAGGATGTG CGCAAGGCCA ACCCGCCCTA CGAGGATACG
CGGGCAAGCC TTGACACCAA ACTCTCCAAG CTGATCGGAG AGGACGAAAA ACTCCGGGGG
GCGCTTGACC TGGTGATCGT GAGCGCGCCC GAAGAGATCG AGCAGCGCAT GGAGGATCTC
ATCTGTTCAC CGGAACAGAC CGCGATTATC CACAAAATCC ACCACGCACT TCACCACCGG
GACTTCCTGA ACCGGCACCG CATTTACGAG GTGGGAAAAC TCCTGTTCGT TGGCCCACCC
GGAACCGGGA AGACTTCCTT AGCGCTTGCC ATGTCCCACT CCATGCACAT GCCGGTCCTC
GAGGTCAGGC TTTCGATGAT CACATCCCAG TATCTGGGGG AGACCTCGAA AAACATCGAC
AAGATCTTCG AACTTGCAAA GAAACTTTCC CCATCTATTC TCTTTATCGA TGAATTCGAT
TTTGTCGCAA AGAGCCGGGT CACCGACGAC CATGGTGCGA TGAAACGGGC CGTCAACTCA
CTCTTAAAAA ACATCGATCG TATCAGCCTG GTAAAAAACG GTGTCCTCCT GATCGGGGCT
ACAAATCACC CGCAATTGCT CGATGAAGCA GCATGGAGAC GTTTTGACGA GATAGTGGAA
TTTTCCCTGC CAAACGAGGA GATGCGCAGG GAGATCATAA AGAGCAGCAC GTCATCCCTG
TCCTGCACCT GTGATTACCA GGAGCTCGCG GCACTCACCG ACGGATTCTC CGGAGCGGAT
ATCCGGATAA TGGTAAAAGA GGCACTGCTC TCGGCCCTCA TGGACAAGCG CGAAAAGATC
GACAGCGCGG ACCTGGAAAC AGGCATACGC ATGATCAGGA ACCGCGACGC GATCCGGAAC
CTGAGCTGGA AATAA
 
Protein sequence
MSGDLESLRI MEVLLTAEIF NQNPTLDLND LTPACREIFC SGDTKSIKRP VYVSDGLMKR 
TLNIADAHDK IAKNPFVSYE EFGQRLKITT LQPAAEWFLA QGGKDLIRQN PALAFFFESF
NGTGVSYQDV RKANPPYEDT RASLDTKLSK LIGEDEKLRG ALDLVIVSAP EEIEQRMEDL
ICSPEQTAII HKIHHALHHR DFLNRHRIYE VGKLLFVGPP GTGKTSLALA MSHSMHMPVL
EVRLSMITSQ YLGETSKNID KIFELAKKLS PSILFIDEFD FVAKSRVTDD HGAMKRAVNS
LLKNIDRISL VKNGVLLIGA TNHPQLLDEA AWRRFDEIVE FSLPNEEMRR EIIKSSTSSL
SCTCDYQELA ALTDGFSGAD IRIMVKEALL SALMDKREKI DSADLETGIR MIRNRDAIRN
LSWK