Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0485 |
Symbol | |
ID | 5410170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 468692 |
End bp | 469414 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867697 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001403646 |
Protein GI | 154150028 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.300873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC AGCTGCTGGG GACCGGGGAT GCCATAGGCA CACCCAAGAT CGGGTGCGAC TGCCCCCAAT GCCAGCATGC ACAGAAGACC GGCATCGGCC GGCTGCGGAC CTCCCTTCTT ATCGAACAGG ACGGCCGCCA TATCCTTGTT GACACCTCAC CCGATCTCCG CCAGCAGCTG ATCAGGTCAG GTTCACCCCA TATCGATGCC GTGGTCTGGA CCCACGGGCA CTACGACCAT TTCATGGGCT TTGGCGAGTT TTACCGGGTC CAGAAGTGTC CCCCGGTGTA TGCCCCGGAG CCGGTGCTCC GGTACTGCGG CGGAACGTTC AGATTCCTTG AGTTCGAACA AAATCCGGTG GAGCCGTACG TACCGTTCGA ACTTTTTGGT ATCACGATCA CGCCATTCCT CGTAAAACAT CCCCCGGCAT ACACCTGCGG GTTTGTCTTT GAAAGGGGCG GTGTAAGAGT AGGGTACACC TCGGACACCA ACCGGGATAT CCCGCAAAAG AGTCTCAACC TGCTCGAAAA TCTCGATCTC CTGCTTGTGG ATGCACTCGT CCCCTCGCAC ATGACCATTA CCAAGCATAT GAACTACCTC GATGCCTGCA CGCTGGCCGA AAGCCTGCAC CCGAAGGCAT TCCGTTGCAT CCATATCAGT CATATGATGC CGTGGGAATA CCCACACCTT GCCCATGATG GCGACATTTT TGAATTTCCC TAA
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Protein sequence | MKVQLLGTGD AIGTPKIGCD CPQCQHAQKT GIGRLRTSLL IEQDGRHILV DTSPDLRQQL IRSGSPHIDA VVWTHGHYDH FMGFGEFYRV QKCPPVYAPE PVLRYCGGTF RFLEFEQNPV EPYVPFELFG ITITPFLVKH PPAYTCGFVF ERGGVRVGYT SDTNRDIPQK SLNLLENLDL LLVDALVPSH MTITKHMNYL DACTLAESLH PKAFRCIHIS HMMPWEYPHL AHDGDIFEFP
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