Gene Mboo_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0485 
Symbol 
ID5410170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp468692 
End bp469414 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content56% 
IMG OID640867697 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001403646 
Protein GI154150028 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.300873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC AGCTGCTGGG GACCGGGGAT GCCATAGGCA CACCCAAGAT CGGGTGCGAC 
TGCCCCCAAT GCCAGCATGC ACAGAAGACC GGCATCGGCC GGCTGCGGAC CTCCCTTCTT
ATCGAACAGG ACGGCCGCCA TATCCTTGTT GACACCTCAC CCGATCTCCG CCAGCAGCTG
ATCAGGTCAG GTTCACCCCA TATCGATGCC GTGGTCTGGA CCCACGGGCA CTACGACCAT
TTCATGGGCT TTGGCGAGTT TTACCGGGTC CAGAAGTGTC CCCCGGTGTA TGCCCCGGAG
CCGGTGCTCC GGTACTGCGG CGGAACGTTC AGATTCCTTG AGTTCGAACA AAATCCGGTG
GAGCCGTACG TACCGTTCGA ACTTTTTGGT ATCACGATCA CGCCATTCCT CGTAAAACAT
CCCCCGGCAT ACACCTGCGG GTTTGTCTTT GAAAGGGGCG GTGTAAGAGT AGGGTACACC
TCGGACACCA ACCGGGATAT CCCGCAAAAG AGTCTCAACC TGCTCGAAAA TCTCGATCTC
CTGCTTGTGG ATGCACTCGT CCCCTCGCAC ATGACCATTA CCAAGCATAT GAACTACCTC
GATGCCTGCA CGCTGGCCGA AAGCCTGCAC CCGAAGGCAT TCCGTTGCAT CCATATCAGT
CATATGATGC CGTGGGAATA CCCACACCTT GCCCATGATG GCGACATTTT TGAATTTCCC
TAA
 
Protein sequence
MKVQLLGTGD AIGTPKIGCD CPQCQHAQKT GIGRLRTSLL IEQDGRHILV DTSPDLRQQL 
IRSGSPHIDA VVWTHGHYDH FMGFGEFYRV QKCPPVYAPE PVLRYCGGTF RFLEFEQNPV
EPYVPFELFG ITITPFLVKH PPAYTCGFVF ERGGVRVGYT SDTNRDIPQK SLNLLENLDL
LLVDALVPSH MTITKHMNYL DACTLAESLH PKAFRCIHIS HMMPWEYPHL AHDGDIFEFP