Gene Mboo_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0480 
Symbol 
ID5410165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp464809 
End bp465789 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content53% 
IMG OID640867692 
ProductGTP cyclohydrolase 
Protein accessionYP_001403641 
Protein GI154150023 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAGG CCCCGGAACA GCCGTTCAGC GGGAAACTGC CTGACGTTCA GGCAACATCC 
CCCGATGTAA GGATTAACCT GACCAGGGTC GGGGTGAAAA ATGTAAAAAA ACTTGTCGAG
GTTACCCGCC CCGATAAAAG ACCGGTTGTT TTTATCTCGA ACTTCGATGT TTATGTGGAT
CTGCCCGGAA GCCTCAAAGG TGCTAACCTC TCACGGAACT TTGAGGTGAT CGATGAGGTA
CTCCAGCAGG CAATTGATGG CGAAGTCAAC GAGATCGAGA ACCTTTGCAG TGCTGTGGCA
CGCAAGCTGC TTGACCGGCA TGAATATGCG GATCGCACGG AAGTACTCAT GCGCAGCGAG
TTCATGGTCA AGCGCGAGAC ACCGGTGAGC CACACAACAT GCCACGAAGT GGTCAAGGTC
CATGCCCGGG CAATTGCAAA GAGAACTTTC CGCGATCCCA TTGTAAGAAA GAGCATTGGT
GCCGAGGTTA CCGGCATGAC CGCCTGCCCC TGTGCGCAGA ATATCATGAA GGAGCGGGCC
AACCACGTTC TTGAAGGGCT GGGTATTGAC CAGAAGACCA TTGATGCCTT CTTTGCCGAA
GTTCCCATGG CCACCCACAA CCAGCGGGGC CGGGGTTTCC TCTGCATCGA GACCGATGAC
GACCAGCATG TGGACCTTGA AAAGATCATC AGGATCCTCA AAGAATCCAT GAGCGCCGGC
ATTTATGAGC TCCTTAAACG CGGCGATGAA AGTGCCGTTG TGCTTGCCGC GCACAAAAAT
CCGCGATTTG TGGAAGACTG CGTCCGGGAA ATGGCAAAGA AAGTTCTGAG CGGGTTTGAT
TACCTGCCGG GAGATGCCGT TGTCACCATC AAACAGACAA ATGAAGAAAG CATCCACCAG
CATGACGCGT ACGCTGAACG GAGGGCAACG CTTGCAGAAT TGCAGGATGA ACTCAACGGC
GATCACAAAA CATCCTGCTG A
 
Protein sequence
MDKAPEQPFS GKLPDVQATS PDVRINLTRV GVKNVKKLVE VTRPDKRPVV FISNFDVYVD 
LPGSLKGANL SRNFEVIDEV LQQAIDGEVN EIENLCSAVA RKLLDRHEYA DRTEVLMRSE
FMVKRETPVS HTTCHEVVKV HARAIAKRTF RDPIVRKSIG AEVTGMTACP CAQNIMKERA
NHVLEGLGID QKTIDAFFAE VPMATHNQRG RGFLCIETDD DQHVDLEKII RILKESMSAG
IYELLKRGDE SAVVLAAHKN PRFVEDCVRE MAKKVLSGFD YLPGDAVVTI KQTNEESIHQ
HDAYAERRAT LAELQDELNG DHKTSC