| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0474 |
|---|
| Symbol | |
|---|
| ID | 5411109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 459487 |
|---|
| End bp | 460206 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640867686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403635 |
|---|
| Protein GI | 154150017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.568097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGA AATGCAGGAA CTGCGGAGCA CCCGCCCCGG AAACCAATTC GAAGTTCTGC
GATCTGTGCG GGGCACCGCT CATCGAAGAA CCGGTAACAC CGCAGGGGCT GCCGGTCTGT
CCATCGTGTG GTGCCATTGT CTCGGATAAA AAAGCGCAGT TCTGCGATAT CTGTGGAGCT
CCTCTGGCAA AACAGGTCTG CCCTTCGTGC GGAACTCCAG CCCCGTCCTC CCGGTCAAAG
TTCTGTACCC GGTGCGGTGC AACCTTTGGG CCGCCAGTTC CGGTCAAAAG CCGGGCAGGT
ACGATTTCTT CCGGTGCGGC AGAGCCAGAA CCAGAGCCGG TGGTGGTCAG GTCACGGAAA
GGACACAAGC CCGAACCTGG TCCTGTCCCT GCGGATGTTT CTGAGGAGTG GGACCCGTGG
ACCGACGGGG ATCCGCTCTA TGATGTCTCG GCTCCTCTGC CGATTCAGCC GCAACCGAGG
CCGCTCACCG ATCTTGAACG TATTGCCGCG GGAGTCCCCC GCCCCAAACC GGCCAAAGGG
GAGAGTGAGG ACCAGCACTC TTCTGGCCAA CAGAAAAAGT ATTCCCATCT CCCCCTGGTA
GCAGATGAAT TGCGCGAGGA GGCCGAACGC CGCCGCTCTG CGTACGACAC CGGGGAGAGC
AAGGGACCCA GCGGTCGCAA AGGAAAACAG GGGAAAAAAG GCGGGCTGTT TAAATTTTAA
|
|---|
| Protein sequence | MARKCRNCGA PAPETNSKFC DLCGAPLIEE PVTPQGLPVC PSCGAIVSDK KAQFCDICGA
PLAKQVCPSC GTPAPSSRSK FCTRCGATFG PPVPVKSRAG TISSGAAEPE PEPVVVRSRK
GHKPEPGPVP ADVSEEWDPW TDGDPLYDVS APLPIQPQPR PLTDLERIAA GVPRPKPAKG
ESEDQHSSGQ QKKYSHLPLV ADELREEAER RRSAYDTGES KGPSGRKGKQ GKKGGLFKF
|
|---|
| |