| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0470 |
|---|
| Symbol | |
|---|
| ID | 5411105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 454497 |
|---|
| End bp | 454997 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640867682 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403631 |
|---|
| Protein GI | 154150013 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0817214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.048877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA AACCGGAGCC CGTAGACTAT ACCTATACCC CTATTGGGAC GATACATTCC
CCATTTAAGG ATATTGTCGG TATGCCCATC CAGCCCACCG GTGCCCGGGG CATTCGGGGC
ACTATCGAGA TCAGGAGCGA TCTCAAGGGC GGGCTTGCCG ATCTTGAGCG TTTCTCCCGG
ATCATCCTGC TCTATTCCCT GCACCGCTGT ACCGGTTACA GCCTGAAAGT CTCGCCATTC
CTTGACCCTA CACCCCATGG AATCTTTGCT ACGCGATCGC CAAAGCGCCC GAATGCGATT
GGCTTTTCCA TTGTGCGGCT CGTGGGAATT GACGATTGTA CTCTTACCAT TGAGGATGTC
GATATCCTCG ACGGCACACC GCTTCTGGAT ATCAAGCCGT ACGTGCCGGC GTTCGATTCC
TATCCCGATG AACGCAGCGG GTGGCTTGGT GCGGTCGCGC ATAATGCACA GCACGCGAAA
TCCGACGACC GGTTCCAGTG A
|
|---|
| Protein sequence | MSEKPEPVDY TYTPIGTIHS PFKDIVGMPI QPTGARGIRG TIEIRSDLKG GLADLERFSR
IILLYSLHRC TGYSLKVSPF LDPTPHGIFA TRSPKRPNAI GFSIVRLVGI DDCTLTIEDV
DILDGTPLLD IKPYVPAFDS YPDERSGWLG AVAHNAQHAK SDDRFQ
|
|---|
| |